Actual source code: bag.c

  1: #include <petsc/private/petscimpl.h>
  2: #include <petsc/private/bagimpl.h>
  3: #include <petscviewer.h>

  5: /*
  6:       Adds item to the linked list in a bag
  7: */
  8: static PetscErrorCode PetscBagRegister_Private(PetscBag bag, PetscBagItem item, const char *name, const char *help)
  9: {
 10:   PetscFunctionBegin;
 11:   PetscCall(PetscStrncpy(item->name, name, PETSC_BAG_NAME_LENGTH - 1));
 12:   PetscCall(PetscStrncpy(item->help, help, PETSC_BAG_HELP_LENGTH - 1));
 13:   if (bag->bagitems) {
 14:     PetscBagItem nitem = bag->bagitems;

 16:     while (nitem->next) nitem = nitem->next;
 17:     nitem->next = item;
 18:   } else bag->bagitems = item;
 19:   bag->count++;
 20:   PetscFunctionReturn(PETSC_SUCCESS);
 21: }

 23: /*@C
 24:   PetscBagRegisterEnum - add an enum value to a `PetscBag`

 26:   Logically Collective

 28:   Input Parameters:
 29: + bag      - the bag of values
 30: . addr     - location of enum in struct, for example `&params->dt`
 31: . list     - array of strings containing names of enum values followed by enum name followed by enum prefix
 32: . mdefault - the initial value, cast with (`PetscEnum`)
 33: . name     - the name of the item
 34: - help     - longer string with more information about the value

 36:   Level: beginner

 38: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
 39:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
 40:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`
 41: @*/
 42: PetscErrorCode PetscBagRegisterEnum(PetscBag bag, void *addr, const char *const *list, PetscEnum mdefault, const char *name, const char *help)
 43: {
 44:   PetscBagItem item;
 45:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
 46:   PetscBool    printhelp;
 47:   PetscInt     i = 0;

 49:   PetscFunctionBegin;
 50:   PetscAssertPointer(bag, 1);
 51:   PetscAssertPointer(addr, 2);
 52:   PetscAssertPointer(list, 3);
 53:   PetscAssertPointer(name, 5);
 54:   PetscAssertPointer(help, 6);
 55:   nname[0] = '-';
 56:   nname[1] = 0;
 57:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
 58:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
 59:   if (printhelp) {
 60:     while (list[i++]);
 61:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%s>: (%s) %s (choose one of) ", bag->bagprefix ? bag->bagprefix : "", name, list[mdefault], list[i - 3], help));
 62:     for (i = 0; list[i + 2]; i++) PetscCall((*PetscHelpPrintf)(bag->bagcomm, " %s", list[i]));
 63:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, "\n"));
 64:   }
 65:   PetscCall(PetscOptionsGetEnum(NULL, bag->bagprefix, nname, list, &mdefault, NULL));

 67:   PetscCall(PetscNew(&item));
 68:   item->dtype  = PETSC_ENUM;
 69:   item->offset = ((char *)addr) - ((char *)bag);
 70:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
 71:   item->next  = NULL;
 72:   item->msize = 1;
 73:   PetscCall(PetscStrArrayallocpy(list, (char ***)&item->list));
 74:   *(PetscEnum *)addr = mdefault;
 75:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
 76:   PetscFunctionReturn(PETSC_SUCCESS);
 77: }

 79: /*@C
 80:   PetscBagRegisterIntArray - add a `PetscInt` array to a `PetscBag`

 82:   Logically Collective

 84:   Input Parameters:
 85: + bag   - the bag of values
 86: . addr  - location of integer in struct, for example `&params->i`
 87: . msize - number of entries in array
 88: . name  - name of the array
 89: - help  - longer string with more information about the value

 91:   Level: beginner

 93: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
 94:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
 95:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
 96: @*/
 97: PetscErrorCode PetscBagRegisterIntArray(PetscBag bag, void *addr, PetscInt msize, const char *name, const char *help)
 98: {
 99:   PetscBagItem item;
100:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
101:   PetscBool    printhelp;
102:   PetscInt     i, tmp = msize;

104:   PetscFunctionBegin;
105:   PetscAssertPointer(bag, 1);
106:   PetscAssertPointer(addr, 2);
107:   PetscAssertPointer(name, 4);
108:   PetscAssertPointer(help, 5);
109:   nname[0] = '-';
110:   nname[1] = 0;
111:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
112:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
113:   if (printhelp) {
114:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <", bag->bagprefix ? bag->bagprefix : "", name));
115:     for (i = 0; i < msize; i++) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "%" PetscInt_FMT " ", *((PetscInt *)addr) + i));
116:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, ">: %s \n", help));
117:   }
118:   PetscCall(PetscOptionsGetIntArray(NULL, bag->bagprefix, nname, (PetscInt *)addr, &tmp, NULL));

120:   PetscCall(PetscNew(&item));
121:   item->dtype  = PETSC_INT;
122:   item->offset = ((char *)addr) - ((char *)bag);
123:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
124:   item->next  = NULL;
125:   item->msize = msize;
126:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
127:   PetscFunctionReturn(PETSC_SUCCESS);
128: }

130: /*@C
131:   PetscBagRegisterRealArray - add a `PetscReal` array to a `PetscBag`

133:   Logically Collective

135:   Input Parameters:
136: + bag   - the bag of values
137: . addr  - location of real array in struct, for example `&params->d`
138: . msize - number of entries in the array
139: . name  - name of the array
140: - help  - longer string with more information about the value

142:   Level: beginner

144: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
145:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
146:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
147: @*/
148: PetscErrorCode PetscBagRegisterRealArray(PetscBag bag, void *addr, PetscInt msize, const char *name, const char *help)
149: {
150:   PetscBagItem item;
151:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
152:   PetscBool    printhelp;
153:   PetscInt     i, tmp = msize;

155:   PetscFunctionBegin;
156:   PetscAssertPointer(bag, 1);
157:   PetscAssertPointer(addr, 2);
158:   PetscAssertPointer(name, 4);
159:   PetscAssertPointer(help, 5);
160:   nname[0] = '-';
161:   nname[1] = 0;
162:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
163:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
164:   if (printhelp) {
165:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <", bag->bagprefix ? bag->bagprefix : "", name));
166:     for (i = 0; i < msize; i++) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "%g ", (double)*((PetscReal *)addr) + i));
167:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, ">: %s \n", help));
168:   }
169:   PetscCall(PetscOptionsGetRealArray(NULL, bag->bagprefix, nname, (PetscReal *)addr, &tmp, NULL));

171:   PetscCall(PetscNew(&item));
172:   item->dtype  = PETSC_REAL;
173:   item->offset = ((char *)addr) - ((char *)bag);
174:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
175:   item->next  = NULL;
176:   item->msize = msize;
177:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
178:   PetscFunctionReturn(PETSC_SUCCESS);
179: }

181: /*@C
182:   PetscBagRegisterInt - add a `PetscInt` value to a `PetscBag`

184:   Logically Collective

186:   Input Parameters:
187: + bag      - the bag of values
188: . addr     - location of integer in struct, for example `&params->i`
189: . mdefault - the initial value
190: . name     - name of the integer
191: - help     - longer string with more information about the value

193:   Level: beginner

195: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
196:           `PetscBagRegisterInt64()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
197:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
198: @*/
199: PetscErrorCode PetscBagRegisterInt(PetscBag bag, void *addr, PetscInt mdefault, const char *name, const char *help)
200: {
201:   PetscBagItem item;
202:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
203:   PetscBool    printhelp;

205:   PetscFunctionBegin;
206:   PetscAssertPointer(bag, 1);
207:   PetscAssertPointer(addr, 2);
208:   PetscAssertPointer(name, 4);
209:   PetscAssertPointer(help, 5);
210:   nname[0] = '-';
211:   nname[1] = 0;
212:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
213:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
214:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%" PetscInt_FMT ">: %s \n", bag->bagprefix ? bag->bagprefix : "", name, mdefault, help));
215:   PetscCall(PetscOptionsGetInt(NULL, bag->bagprefix, nname, &mdefault, NULL));

217:   PetscCall(PetscNew(&item));
218:   item->dtype  = PETSC_INT;
219:   item->offset = ((char *)addr) - ((char *)bag);
220:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
221:   item->next        = NULL;
222:   item->msize       = 1;
223:   *(PetscInt *)addr = mdefault;
224:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
225:   PetscFunctionReturn(PETSC_SUCCESS);
226: }

228: /*@C
229:   PetscBagRegisterInt64 - add a `PetscInt64` value to a `PetscBag`

231:   Logically Collective

233:   Input Parameters:
234: + bag      - the bag of values
235: . addr     - location of integer in struct, for example `&params->i`
236: . mdefault - the initial value
237: . name     - name of the integer
238: - help     - longer string with more information about the value

240:   Level: beginner

242: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
243:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
244:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
245: @*/
246: PetscErrorCode PetscBagRegisterInt64(PetscBag bag, void *addr, PetscInt64 mdefault, const char *name, const char *help)
247: {
248:   PetscBagItem item;
249:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
250:   PetscBool    printhelp;
251:   PetscInt     odefault = (PetscInt)mdefault;
252:   PetscBool    flg;

254:   PetscFunctionBegin;
255:   nname[0] = '-';
256:   nname[1] = 0;
257:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
258:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
259:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%" PetscInt_FMT ">: %s \n", bag->bagprefix ? bag->bagprefix : "", name, odefault, help));
260:   PetscCall(PetscOptionsGetInt(NULL, bag->bagprefix, nname, &odefault, &flg));
261:   if (flg) mdefault = (PetscInt64)odefault;

263:   PetscCall(PetscNew(&item));
264:   item->dtype  = PETSC_INT;
265:   item->offset = ((char *)addr) - ((char *)bag);
266:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
267:   item->next          = NULL;
268:   item->msize         = 1;
269:   *(PetscInt64 *)addr = mdefault;
270:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
271:   PetscFunctionReturn(PETSC_SUCCESS);
272: }

274: /*@C
275:   PetscBagRegisterBoolArray - add a n `PetscBool` values to a `PetscBag`

277:   Logically Collective

279:   Input Parameters:
280: + bag   - the bag of values
281: . addr  - location of boolean array in struct, for example `&params->b`
282: . msize - number of entries in array
283: . name  - name of the boolean array
284: - help  - longer string with more information about the value

286:   Level: beginner

288: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
289:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
290:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
291: @*/
292: PetscErrorCode PetscBagRegisterBoolArray(PetscBag bag, void *addr, PetscInt msize, const char *name, const char *help)
293: {
294:   PetscBagItem item;
295:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
296:   PetscBool    printhelp;
297:   PetscInt     i, tmp = msize;

299:   PetscFunctionBegin;
300:   PetscAssertPointer(bag, 1);
301:   PetscAssertPointer(addr, 2);
302:   PetscAssertPointer(name, 4);
303:   PetscAssertPointer(help, 5);
304:   nname[0] = '-';
305:   nname[1] = 0;
306:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
307:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
308:   if (printhelp) {
309:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <", bag->bagprefix ? bag->bagprefix : "", name));
310:     for (i = 0; i < msize; i++) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "%" PetscInt_FMT " ", *((PetscInt *)addr) + i));
311:     PetscCall((*PetscHelpPrintf)(bag->bagcomm, ">: %s \n", help));
312:   }
313:   PetscCall(PetscOptionsGetBoolArray(NULL, bag->bagprefix, nname, (PetscBool *)addr, &tmp, NULL));

315:   PetscCall(PetscNew(&item));
316:   item->dtype  = PETSC_BOOL;
317:   item->offset = ((char *)addr) - ((char *)bag);
318:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
319:   item->next  = NULL;
320:   item->msize = msize;
321:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
322:   PetscFunctionReturn(PETSC_SUCCESS);
323: }

325: /*@C
326:   PetscBagRegisterString - add a string value to a `PetscBag`

328:   Logically Collective

330:   Input Parameters:
331: + bag      - the bag of values
332: . addr     - location of start of string in struct, for example `&params->mystring`
333: . msize    - length of the string space in the struct
334: . mdefault - the initial value
335: . name     - name of the string
336: - help     - longer string with more information about the value

338:   Level: beginner

340:   Note:
341:   The struct must have the field char mystring[`msize`]; not char *mystring

343: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
344:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
345:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
346: @*/
347: PetscErrorCode PetscBagRegisterString(PetscBag bag, void *addr, PetscInt msize, const char *mdefault, const char *name, const char *help)
348: {
349:   PetscBagItem item;
350:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
351:   PetscBool    printhelp;

353:   PetscFunctionBegin;
354:   PetscAssertPointer(bag, 1);
355:   PetscAssertPointer(addr, 2);
356:   PetscAssertPointer(mdefault, 4);
357:   PetscAssertPointer(name, 5);
358:   PetscAssertPointer(help, 6);
359:   nname[0] = '-';
360:   nname[1] = 0;
361:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
362:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
363:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%s>: %s \n", bag->bagprefix ? bag->bagprefix : "", name, mdefault, help));

365:   PetscCall(PetscNew(&item));
366:   item->dtype  = PETSC_CHAR;
367:   item->offset = ((char *)addr) - ((char *)bag);
368:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
369:   item->next  = NULL;
370:   item->msize = msize;
371:   if (mdefault != (char *)addr) PetscCall(PetscStrncpy((char *)addr, mdefault, msize - 1));
372:   PetscCall(PetscOptionsGetString(NULL, bag->bagprefix, nname, (char *)addr, msize, NULL));
373:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
374:   PetscFunctionReturn(PETSC_SUCCESS);
375: }

377: /*@C
378:   PetscBagRegisterReal - add a `PetscReal` value to a `PetscBag`

380:   Logically Collective

382:   Input Parameters:
383: + bag      - the bag of values
384: . addr     - location of `PetscReal` in struct, for example `&params->r`
385: . mdefault - the initial value
386: . name     - name of the variable
387: - help     - longer string with more information about the value

389:   Level: beginner

391: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
392:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
393:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
394: @*/
395: PetscErrorCode PetscBagRegisterReal(PetscBag bag, void *addr, PetscReal mdefault, const char *name, const char *help)
396: {
397:   PetscBagItem item;
398:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
399:   PetscBool    printhelp;

401:   PetscFunctionBegin;
402:   PetscAssertPointer(bag, 1);
403:   PetscAssertPointer(addr, 2);
404:   PetscAssertPointer(name, 4);
405:   PetscAssertPointer(help, 5);
406:   nname[0] = '-';
407:   nname[1] = 0;
408:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
409:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
410:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%g>: %s \n", bag->bagprefix ? bag->bagprefix : "", name, (double)mdefault, help));
411:   PetscCall(PetscOptionsGetReal(NULL, bag->bagprefix, nname, &mdefault, NULL));

413:   PetscCall(PetscNew(&item));
414:   item->dtype  = PETSC_REAL;
415:   item->offset = ((char *)addr) - ((char *)bag);
416:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
417:   item->next         = NULL;
418:   item->msize        = 1;
419:   *(PetscReal *)addr = mdefault;
420:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
421:   PetscFunctionReturn(PETSC_SUCCESS);
422: }

424: /*@C
425:   PetscBagRegisterScalar - add a `PetscScalar` value to a `PetscBag`

427:   Logically Collective

429:   Input Parameters:
430: + bag      - the bag of values
431: . addr     - location of `PetscScalar` in struct, for example `&params->c`
432: . mdefault - the initial value
433: . name     - name of the variable
434: - help     - longer string with more information about the value

436:   Level: beginner

438: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
439:           `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagSetFromOptions()`,
440:           `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
441: @*/
442: PetscErrorCode PetscBagRegisterScalar(PetscBag bag, void *addr, PetscScalar mdefault, const char *name, const char *help)
443: {
444:   PetscBagItem item;
445:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
446:   PetscBool    printhelp;

448:   PetscFunctionBegin;
449:   PetscAssertPointer(bag, 1);
450:   PetscAssertPointer(addr, 2);
451:   PetscAssertPointer(name, 4);
452:   PetscAssertPointer(help, 5);
453:   nname[0] = '-';
454:   nname[1] = 0;
455:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
456:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
457:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%g + %gi>: %s \n", bag->bagprefix ? bag->bagprefix : "", name, (double)PetscRealPart(mdefault), (double)PetscImaginaryPart(mdefault), help));
458:   PetscCall(PetscOptionsGetScalar(NULL, bag->bagprefix, nname, &mdefault, NULL));

460:   PetscCall(PetscNew(&item));
461:   item->dtype  = PETSC_SCALAR;
462:   item->offset = ((char *)addr) - ((char *)bag);
463:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
464:   item->next           = NULL;
465:   item->msize          = 1;
466:   *(PetscScalar *)addr = mdefault;
467:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
468:   PetscFunctionReturn(PETSC_SUCCESS);
469: }

471: /*@C
472:   PetscBagRegisterBool - add a `PetscBool` to a `PetscBag`

474:   Logically Collective

476:   Input Parameters:
477: + bag      - the bag of values
478: . addr     - location of `PetscBool` in struct, for example `&params->b`
479: . mdefault - the initial value, either `PETSC_FALSE` or `PETSC_TRUE`
480: . name     - name of the variable
481: - help     - longer string with more information about the value

483:   Level: beginner

485: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
486:           `PetscBagRegisterInt()`, `PetscBagRegisterScalar()`
487:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
488: @*/
489: PetscErrorCode PetscBagRegisterBool(PetscBag bag, void *addr, PetscBool mdefault, const char *name, const char *help)
490: {
491:   PetscBagItem item;
492:   char         nname[PETSC_BAG_NAME_LENGTH + 1];
493:   PetscBool    printhelp;

495:   PetscFunctionBegin;
496:   PetscAssertPointer(bag, 1);
497:   PetscAssertPointer(addr, 2);
498:   PetscAssertPointer(name, 4);
499:   PetscAssertPointer(help, 5);
500:   /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */
501:   PetscCheck(mdefault == PETSC_FALSE || mdefault == PETSC_TRUE, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Boolean %s %s must be boolean; integer value %d", name, help, (int)mdefault);
502:   nname[0] = '-';
503:   nname[1] = 0;
504:   PetscCall(PetscStrlcat(nname, name, PETSC_BAG_NAME_LENGTH));
505:   PetscCall(PetscOptionsHasHelp(NULL, &printhelp));
506:   if (printhelp) PetscCall((*PetscHelpPrintf)(bag->bagcomm, "  -%s%s <%s>: %s \n", bag->bagprefix ? bag->bagprefix : "", name, PetscBools[mdefault], help));
507:   PetscCall(PetscOptionsGetBool(NULL, bag->bagprefix, nname, &mdefault, NULL));

509:   PetscCall(PetscNew(&item));
510:   item->dtype  = PETSC_BOOL;
511:   item->offset = ((char *)addr) - ((char *)bag);
512:   PetscCheck(item->offset <= bag->bagsize, PETSC_COMM_SELF, PETSC_ERR_ARG_OUTOFRANGE, "Registered item %s %s is not in bag memory space", name, help);
513:   item->next         = NULL;
514:   item->msize        = 1;
515:   *(PetscBool *)addr = mdefault;
516:   PetscCall(PetscBagRegister_Private(bag, item, name, help));
517:   PetscFunctionReturn(PETSC_SUCCESS);
518: }

520: /*@C
521:   PetscBagDestroy - Destroys a `PetscBag`

523:   Collective

525:   Input Parameter:
526: . bag - the bag of values

528:   Level: beginner

530: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
531:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
532:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
533: @*/
534: PetscErrorCode PetscBagDestroy(PetscBag *bag)
535: {
536:   PetscBagItem nitem;

538:   PetscFunctionBegin;
539:   if (!*bag) PetscFunctionReturn(PETSC_SUCCESS);
540:   PetscAssertPointer(*bag, 1);
541:   nitem = (*bag)->bagitems;
542:   while (nitem) {
543:     PetscBagItem item = nitem->next;

545:     if (nitem->list) PetscCall(PetscStrArrayDestroy(&nitem->list));
546:     PetscCall(PetscFree(nitem));
547:     nitem = item;
548:   }
549:   if ((*bag)->bagprefix) PetscCall(PetscFree((*bag)->bagprefix));
550:   PetscCall(PetscFree(*bag));
551:   PetscFunctionReturn(PETSC_SUCCESS);
552: }

554: /*@
555:   PetscBagSetFromOptions - Allows setting entries to a `PetscBag` using the options database

557:   Collective

559:   Input Parameter:
560: . bag - the bag of values

562:   Level: beginner

564:   Note:
565:   The options database keys for the entries are of the form `-[bagprefix]_name value`

567: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagLoad()`, `PetscBagGetData()`
568:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
569:           `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagRegisterEnum()`
570: @*/
571: PetscErrorCode PetscBagSetFromOptions(PetscBag bag)
572: {
573:   PetscBagItem nitem = bag->bagitems;
574:   char         name[PETSC_BAG_NAME_LENGTH + 1], helpname[PETSC_BAG_NAME_LENGTH + PETSC_BAG_HELP_LENGTH + 3];
575:   PetscInt     n;

577:   PetscFunctionBegin;
578:   PetscAssertPointer(bag, 1);
579:   PetscCall(PetscStrncpy(helpname, bag->bagname, sizeof(helpname)));
580:   PetscCall(PetscStrlcat(helpname, " ", sizeof(helpname)));
581:   PetscCall(PetscStrlcat(helpname, bag->baghelp, sizeof(helpname)));
582:   PetscOptionsBegin(bag->bagcomm, bag->bagprefix, helpname, NULL);
583:   while (nitem) {
584:     name[0] = '-';
585:     name[1] = 0;
586:     PetscCall(PetscStrlcat(name, nitem->name, sizeof(name)));
587:     if (nitem->dtype == PETSC_CHAR) { /* special handling for fortran required? [due to space padding vs null termination] */
588:       char *value = (char *)(((char *)bag) + nitem->offset);
589:       PetscCall(PetscOptionsString(name, nitem->help, "", value, value, nitem->msize, NULL));
590:     } else if (nitem->dtype == PETSC_REAL) {
591:       PetscReal *value = (PetscReal *)(((char *)bag) + nitem->offset);
592:       if (nitem->msize == 1) {
593:         PetscCall(PetscOptionsReal(name, nitem->help, "", *value, value, NULL));
594:       } else {
595:         n = nitem->msize;
596:         PetscCall(PetscOptionsRealArray(name, nitem->help, "", value, &n, NULL));
597:       }
598:     } else if (nitem->dtype == PETSC_SCALAR) {
599:       PetscScalar *value = (PetscScalar *)(((char *)bag) + nitem->offset);
600:       PetscCall(PetscOptionsScalar(name, nitem->help, "", *value, value, NULL));
601:     } else if (nitem->dtype == PETSC_INT) {
602:       PetscInt *value = (PetscInt *)(((char *)bag) + nitem->offset);
603:       if (nitem->msize == 1) {
604:         PetscCall(PetscOptionsInt(name, nitem->help, "", *value, value, NULL));
605:       } else {
606:         n = nitem->msize;
607:         PetscCall(PetscOptionsIntArray(name, nitem->help, "", value, &n, NULL));
608:       }
609:     } else if (nitem->dtype == PETSC_ENUM) {
610:       PetscEnum *value = (PetscEnum *)(((char *)bag) + nitem->offset);
611:       PetscInt   i     = 0;
612:       while (nitem->list[i++]);
613:       PetscCall(PetscOptionsEnum(name, nitem->help, nitem->list[i - 3], (const char *const *)nitem->list, *value, value, NULL));
614:     } else if (nitem->dtype == PETSC_BOOL) {
615:       PetscBool *value = (PetscBool *)(((char *)bag) + nitem->offset);
616:       if (nitem->msize == 1) {
617:         PetscCall(PetscOptionsBool(name, nitem->help, "", *value, value, NULL));
618:       } else {
619:         n = nitem->msize;
620:         PetscCall(PetscOptionsBoolArray(name, nitem->help, "", value, &n, NULL));
621:       }
622:     }
623:     nitem = nitem->next;
624:   }
625:   PetscOptionsEnd();
626:   PetscFunctionReturn(PETSC_SUCCESS);
627: }

629: /*@C
630:   PetscBagView - Views a bag of values as either ASCII text or a binary file

632:   Collective

634:   Input Parameters:
635: + bag  - the bag of values
636: - view - location to view the values

638:   Level: beginner

640:   Note:
641:   Currently PETSc bags saved in a binary file can only be read back
642:   in on a machine with the same binary format.

644: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagLoad()`, `PetscBagGetData()`
645:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`, `PetscBagRegisterEnum()`
646:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`
647: @*/
648: PetscErrorCode PetscBagView(PetscBag bag, PetscViewer view)
649: {
650:   PetscBool    isascii, isbinary;
651:   PetscBagItem nitem = bag->bagitems;

653:   PetscFunctionBegin;
654:   PetscAssertPointer(bag, 1);
656:   PetscCall(PetscObjectTypeCompare((PetscObject)view, PETSCVIEWERASCII, &isascii));
657:   PetscCall(PetscObjectTypeCompare((PetscObject)view, PETSCVIEWERBINARY, &isbinary));
658:   if (isascii) {
659:     if (bag->bagprefix) {
660:       PetscCall(PetscViewerASCIIPrintf(view, "PetscBag Object:  %s (%s) %s\n", bag->bagname, bag->bagprefix, bag->baghelp));
661:     } else {
662:       PetscCall(PetscViewerASCIIPrintf(view, "PetscBag Object:  %s %s\n", bag->bagname, bag->baghelp));
663:     }
664:     while (nitem) {
665:       if (nitem->dtype == PETSC_CHAR) {
666:         char *value             = (char *)(((char *)bag) + nitem->offset);
667:         char  tmp               = value[nitem->msize - 1]; /* special handling for fortran chars without null terminator */
668:         value[nitem->msize - 1] = 0;
669:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = %s; %s\n", nitem->name, value, nitem->help));
670:         value[nitem->msize - 1] = tmp;
671:       } else if (nitem->dtype == PETSC_REAL) {
672:         PetscReal *value = (PetscReal *)(((char *)bag) + nitem->offset);
673:         PetscInt   i;
674:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = ", nitem->name));
675:         for (i = 0; i < nitem->msize; i++) PetscCall(PetscViewerASCIIPrintf(view, "%g ", (double)value[i]));
676:         PetscCall(PetscViewerASCIIPrintf(view, "; %s\n", nitem->help));
677:       } else if (nitem->dtype == PETSC_SCALAR) {
678:         PetscScalar value = *(PetscScalar *)(((char *)bag) + nitem->offset);
679: #if defined(PETSC_USE_COMPLEX)
680:         if ((double)PetscImaginaryPart(value)) {
681:           PetscCall(PetscViewerASCIIPrintf(view, "  %s = %g + %gi; %s\n", nitem->name, (double)PetscRealPart(value), (double)PetscImaginaryPart(value), nitem->help));
682:         } else {
683:           PetscCall(PetscViewerASCIIPrintf(view, "  %s = %g; %s\n", nitem->name, (double)PetscRealPart(value), nitem->help));
684:         }
685: #else
686:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = %g; %s\n", nitem->name, (double)value, nitem->help));
687: #endif
688:       } else if (nitem->dtype == PETSC_INT) {
689:         PetscInt i, *value = (PetscInt *)(((char *)bag) + nitem->offset);
690:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = ", nitem->name));
691:         for (i = 0; i < nitem->msize; i++) PetscCall(PetscViewerASCIIPrintf(view, "%" PetscInt_FMT " ", value[i]));
692:         PetscCall(PetscViewerASCIIPrintf(view, "; %s\n", nitem->help));
693:       } else if (nitem->dtype == PETSC_BOOL) {
694:         PetscBool *value = (PetscBool *)(((char *)bag) + nitem->offset);
695:         PetscInt   i;
696:         /* some Fortran compilers use -1 as boolean */
697:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = ", nitem->name));
698:         for (i = 0; i < nitem->msize; i++) {
699:           if (((int)value[i]) == -1) value[i] = PETSC_TRUE;
700:           /* the checks here with != PETSC_FALSE and PETSC_TRUE is a special case; here we truly demand that the value be 0 or 1 */
701:           PetscCheck(value[i] == PETSC_FALSE || value[i] == PETSC_TRUE, PETSC_COMM_SELF, PETSC_ERR_PLIB, "Boolean value for %s %s is corrupt; integer value %" PetscInt_FMT, nitem->name, nitem->help, (PetscInt)value[i]);
702:           PetscCall(PetscViewerASCIIPrintf(view, " %s", PetscBools[value[i]]));
703:         }
704:         PetscCall(PetscViewerASCIIPrintf(view, "; %s\n", nitem->help));
705:       } else if (nitem->dtype == PETSC_ENUM) {
706:         PetscEnum value = *(PetscEnum *)(((char *)bag) + nitem->offset);
707:         PetscInt  i     = 0;
708:         while (nitem->list[i++]);
709:         PetscCall(PetscViewerASCIIPrintf(view, "  %s = %s; (%s) %s\n", nitem->name, nitem->list[value], nitem->list[i - 3], nitem->help));
710:       }
711:       nitem = nitem->next;
712:     }
713:   } else if (isbinary) {
714:     PetscInt          classid           = PETSC_BAG_FILE_CLASSID, dtype;
715:     PetscInt          deprecatedbagsize = 0;
716:     PetscViewerFormat format;
717:     PetscCall(PetscViewerBinaryWrite(view, &classid, 1, PETSC_INT));
718:     PetscCall(PetscViewerBinaryWrite(view, &deprecatedbagsize, 1, PETSC_INT));
719:     PetscCall(PetscViewerBinaryWrite(view, &bag->count, 1, PETSC_INT));
720:     PetscCall(PetscViewerBinaryWrite(view, bag->bagname, PETSC_BAG_NAME_LENGTH, PETSC_CHAR));
721:     PetscCall(PetscViewerBinaryWrite(view, bag->baghelp, PETSC_BAG_HELP_LENGTH, PETSC_CHAR));
722:     while (nitem) {
723:       PetscCall(PetscViewerBinaryWrite(view, &nitem->offset, 1, PETSC_INT));
724:       dtype = (PetscInt)nitem->dtype;
725:       PetscCall(PetscViewerBinaryWrite(view, &dtype, 1, PETSC_INT));
726:       PetscCall(PetscViewerBinaryWrite(view, nitem->name, PETSC_BAG_NAME_LENGTH, PETSC_CHAR));
727:       PetscCall(PetscViewerBinaryWrite(view, nitem->help, PETSC_BAG_HELP_LENGTH, PETSC_CHAR));
728:       PetscCall(PetscViewerBinaryWrite(view, &nitem->msize, 1, PETSC_INT));
729:       /* some Fortran compilers use -1 as boolean */
730:       if (dtype == PETSC_BOOL && (*(int *)(((char *)bag) + nitem->offset) == -1)) *(int *)(((char *)bag) + nitem->offset) = PETSC_TRUE;

732:       PetscCall(PetscViewerBinaryWrite(view, (((char *)bag) + nitem->offset), nitem->msize, nitem->dtype));
733:       if (dtype == PETSC_ENUM) PetscCall(PetscViewerBinaryWriteStringArray(view, (const char *const *)nitem->list));
734:       nitem = nitem->next;
735:     }
736:     PetscCall(PetscViewerGetFormat(view, &format));
737:     if (format == PETSC_VIEWER_BINARY_MATLAB) {
738:       MPI_Comm comm;
739:       FILE    *info;
740:       PetscCall(PetscObjectGetComm((PetscObject)view, &comm));
741:       PetscCall(PetscViewerBinaryGetInfoPointer(view, &info));
742:       PetscCall(PetscFPrintf(comm, info, "#--- begin code written by PetscViewerBinary for MATLAB format ---#\n"));
743:       PetscCall(PetscFPrintf(comm, info, "#$$ Set.%s = PetscBinaryRead(fd);\n", bag->bagname));
744:       PetscCall(PetscFPrintf(comm, info, "#--- end code written by PetscViewerBinary for MATLAB format ---#\n\n"));
745:     }
746:   }
747:   PetscFunctionReturn(PETSC_SUCCESS);
748: }

750: /*@C
751:   PetscBagViewFromOptions - Processes command line options to determine if/how a `PetscBag` is to be viewed.

753:   Collective

755:   Input Parameters:
756: + bag        - the object
757: . bobj       - optional other object that provides prefix (if `NULL` then the prefix in obj is used)
758: - optionname - option to activate viewing

760:   Level: intermediate

762: .seealso: `PetscBagCreate()`, `PetscBag`, `PetscViewer`
763: @*/
764: PetscErrorCode PetscBagViewFromOptions(PetscBag bag, PetscObject bobj, const char optionname[])
765: {
766:   static PetscBool  incall = PETSC_FALSE;
767:   PetscViewer       viewer;
768:   PetscViewerFormat format;
769:   const char       *prefix, *bprefix = NULL;
770:   PetscBool         flg;

772:   PetscFunctionBegin;
773:   if (incall) PetscFunctionReturn(PETSC_SUCCESS);
774:   incall = PETSC_TRUE;
775:   PetscAssertPointer(bag, 1);
776:   if (bobj) PetscCall(PetscObjectGetOptionsPrefix(bobj, &bprefix));
777:   prefix = bobj ? bprefix : bag->bagprefix;
778:   PetscCall(PetscOptionsGetViewer(bag->bagcomm, NULL, prefix, optionname, &viewer, &format, &flg));
779:   if (flg) {
780:     PetscCall(PetscViewerPushFormat(viewer, format));
781:     PetscCall(PetscBagView(bag, viewer));
782:     PetscCall(PetscViewerFlush(viewer));
783:     PetscCall(PetscViewerPopFormat(viewer));
784:     PetscCall(PetscOptionsRestoreViewer(&viewer));
785:   }
786:   incall = PETSC_FALSE;
787:   PetscFunctionReturn(PETSC_SUCCESS);
788: }

790: /*@C
791:   PetscBagLoad - Loads a bag of values from a binary file

793:   Collective

795:   Input Parameters:
796: + view - file to load values from
797: - bag  - the bag of values

799:   Level: beginner

801:   Note:
802:   You must have created and registered all the fields in the bag before loading into it. This only loads values.

804: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagDestroy()`, `PetscBagView()`, `PetscBagGetData()`
805:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
806:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagGetName()`, `PetscBagRegisterEnum()`
807: @*/
808: PetscErrorCode PetscBagLoad(PetscViewer view, PetscBag bag)
809: {
810:   PetscBool    isbinary;
811:   PetscInt     classid, bagcount, dtype, msize, offset, deprecatedbagsize;
812:   char         name[PETSC_BAG_NAME_LENGTH], help[PETSC_BAG_HELP_LENGTH], **list;
813:   PetscBagItem nitem;
814:   MPI_Comm     comm;
815:   PetscMPIInt  flag;

817:   PetscFunctionBegin;
819:   PetscAssertPointer(bag, 2);
820:   PetscCall(PetscObjectGetComm((PetscObject)view, &comm));
821:   PetscCallMPI(MPI_Comm_compare(comm, bag->bagcomm, &flag));
822:   PetscCheck(flag == MPI_CONGRUENT || flag == MPI_IDENT, PETSC_COMM_SELF, PETSC_ERR_ARG_NOTSAMECOMM, "Different communicators in the viewer and bag");
823:   PetscCall(PetscObjectTypeCompare((PetscObject)view, PETSCVIEWERBINARY, &isbinary));
824:   PetscCheck(isbinary, PETSC_COMM_SELF, PETSC_ERR_SUP, "No support for this viewer type");

826:   PetscCall(PetscViewerBinaryRead(view, &classid, 1, NULL, PETSC_INT));
827:   PetscCheck(classid == PETSC_BAG_FILE_CLASSID, PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Not PetscBag next in binary file");
828:   PetscCall(PetscViewerBinaryRead(view, &deprecatedbagsize, 1, NULL, PETSC_INT));
829:   PetscCall(PetscViewerBinaryRead(view, &bagcount, 1, NULL, PETSC_INT));
830:   PetscCheck(bagcount == bag->count, comm, PETSC_ERR_ARG_INCOMP, "Bag in file has different number of entries %d then passed in bag %d", (int)bagcount, (int)bag->count);
831:   PetscCall(PetscViewerBinaryRead(view, bag->bagname, PETSC_BAG_NAME_LENGTH, NULL, PETSC_CHAR));
832:   PetscCall(PetscViewerBinaryRead(view, bag->baghelp, PETSC_BAG_HELP_LENGTH, NULL, PETSC_CHAR));

834:   nitem = bag->bagitems;
835:   for (PetscInt i = 0; i < bagcount; i++) {
836:     PetscCall(PetscViewerBinaryRead(view, &offset, 1, NULL, PETSC_INT));
837:     /* ignore the offset in the file */
838:     PetscCall(PetscViewerBinaryRead(view, &dtype, 1, NULL, PETSC_INT));
839:     PetscCall(PetscViewerBinaryRead(view, name, PETSC_BAG_NAME_LENGTH, NULL, PETSC_CHAR));
840:     PetscCall(PetscViewerBinaryRead(view, help, PETSC_BAG_HELP_LENGTH, NULL, PETSC_CHAR));
841:     PetscCall(PetscViewerBinaryRead(view, &msize, 1, NULL, PETSC_INT));

843:     if (dtype == (PetscInt)PETSC_CHAR) {
844:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, msize, NULL, PETSC_CHAR));
845:     } else if (dtype == (PetscInt)PETSC_REAL) {
846:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, msize, NULL, PETSC_REAL));
847:     } else if (dtype == (PetscInt)PETSC_SCALAR) {
848:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, 1, NULL, PETSC_SCALAR));
849:     } else if (dtype == (PetscInt)PETSC_INT) {
850:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, msize, NULL, PETSC_INT));
851:     } else if (dtype == (PetscInt)PETSC_BOOL) {
852:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, msize, NULL, PETSC_BOOL));
853:     } else if (dtype == (PetscInt)PETSC_ENUM) {
854:       PetscCall(PetscViewerBinaryRead(view, ((char *)bag) + nitem->offset, 1, NULL, PETSC_ENUM));
855:       PetscCall(PetscViewerBinaryReadStringArray(view, &list));
856:       /* don't need to save list because it is already registered in the bag */
857:       PetscCall(PetscFree(list));
858:     }
859:     nitem = nitem->next;
860:   }
861:   PetscFunctionReturn(PETSC_SUCCESS);
862: }

864: /*@C
865:   PetscBagCreate - Create a bag of values. A `PetscBag` is a representation of a C struct that can be saved to and read from files,
866:   can have values set from the options database

868:   Collective

870:   Input Parameters:
871: + comm    - communicator to share bag
872: - bagsize - size of the C structure holding the values, for example sizeof(mystruct)

874:   Output Parameter:
875: . bag - the bag of values

877:   Level: intermediate

879:   Notes:
880:   After creating the bag, for each entry in the C struct call the appropriate `PetscBagRegisterInt()` etc to define the C structs layout

882:   The size of the A struct must be small enough to fit in a `PetscInt`; by default
883:   `PetscInt` is 4 bytes; this means a bag cannot be larger than 2 gigabytes in length.
884:   The warning about casting to a shorter length can be ignored below unless your A struct is too large

886: .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
887:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
888:           `PetscBagSetFromOptions()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()`
889: @*/
890: PetscErrorCode PetscBagCreate(MPI_Comm comm, size_t bagsize, PetscBag *bag)
891: {
892:   const size_t totalsize = bagsize + sizeof(struct _n_PetscBag) + sizeof(PetscScalar);

894:   PetscFunctionBegin;
895:   PetscAssertPointer(bag, 3);
896:   PetscCall(PetscInfo(NULL, "Creating Bag with total size %d\n", (int)totalsize));
897:   PetscCall(PetscCalloc(totalsize, bag));

899:   (*bag)->bagsize        = totalsize;
900:   (*bag)->bagcomm        = comm;
901:   (*bag)->bagprefix      = NULL;
902:   (*bag)->structlocation = (void *)(((char *)(*bag)) + sizeof(PetscScalar) * (sizeof(struct _n_PetscBag) / sizeof(PetscScalar)) + sizeof(PetscScalar));
903:   PetscFunctionReturn(PETSC_SUCCESS);
904: }

906: /*@C
907:   PetscBagSetName - Sets the name of a bag of values

909:   Not Collective

911:   Level: intermediate

913:   Input Parameters:
914: + bag  - the bag of values
915: . name - the name assigned to the bag
916: - help - help message for bag

918: .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
919:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
920:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()`
921: @*/
922: PetscErrorCode PetscBagSetName(PetscBag bag, const char *name, const char *help)
923: {
924:   PetscFunctionBegin;
925:   PetscAssertPointer(bag, 1);
926:   PetscAssertPointer(name, 2);
927:   PetscAssertPointer(help, 3);
928:   PetscCall(PetscStrncpy(bag->bagname, name, PETSC_BAG_NAME_LENGTH - 1));
929:   PetscCall(PetscStrncpy(bag->baghelp, help, PETSC_BAG_HELP_LENGTH - 1));
930:   PetscFunctionReturn(PETSC_SUCCESS);
931: }

933: /*@C
934:   PetscBagGetName - Gets the name of a bag of values

936:   Not Collective

938:   Level: intermediate

940:   Input Parameter:
941: . bag - the bag of values

943:   Output Parameter:
944: . name - the name assigned to the bag

946: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`, `PetscBagGetData()`
947:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
948:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()`
949: @*/
950: PetscErrorCode PetscBagGetName(PetscBag bag, char **name)
951: {
952:   PetscFunctionBegin;
953:   PetscAssertPointer(bag, 1);
954:   PetscAssertPointer(name, 2);
955:   *name = bag->bagname;
956:   PetscFunctionReturn(PETSC_SUCCESS);
957: }

959: /*@C
960:   PetscBagGetData - Gives back the user - access to memory that
961:   can be used for storing user-data-structure

963:   Not Collective

965:   Input Parameter:
966: . bag - the bag of values

968:   Output Parameter:
969: . data - pointer to memory that will have user-data-structure, this can be cast to a pointer of the type the C struct used in
970:     defining the bag

972:   Level: intermediate

974: .seealso: `PetscBag`, `PetscBagSetName()`, `PetscBagView()`, `PetscBagLoad()`
975:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
976:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()`
977: @*/
978: PetscErrorCode PetscBagGetData(PetscBag bag, void **data)
979: {
980:   PetscFunctionBegin;
981:   PetscAssertPointer(bag, 1);
982:   PetscAssertPointer(data, 2);
983:   *data = bag->structlocation;
984:   PetscFunctionReturn(PETSC_SUCCESS);
985: }

987: /*@C
988:   PetscBagSetOptionsPrefix - Sets the prefix used for searching for all
989:   `PetscBag` items in the options database.

991:   Logically Collective

993:   Level: intermediate

995:   Input Parameters:
996: + bag - the bag of values
997: - pre - the prefix to prepend all Bag item names with.

999:   Note:
1000:   Must be called prior to registering any of the bag items.

1002: .seealso: `PetscBag`, `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`
1003:           `PetscBagSetFromOptions()`, `PetscBagCreate()`, `PetscBagDestroy()`, `PetscBagRegisterEnum()`
1004: @*/
1005: PetscErrorCode PetscBagSetOptionsPrefix(PetscBag bag, const char pre[])
1006: {
1007:   PetscFunctionBegin;
1008:   PetscAssertPointer(bag, 1);
1009:   if (pre) {
1010:     PetscAssertPointer(pre, 2);
1011:     PetscCheck(pre[0] != '-', PETSC_COMM_SELF, PETSC_ERR_ARG_WRONG, "Options prefix should not begin with a hyphen");
1012:     PetscCall(PetscFree(bag->bagprefix));
1013:     PetscCall(PetscStrallocpy(pre, &bag->bagprefix));
1014:   } else PetscCall(PetscFree(bag->bagprefix));
1015:   PetscFunctionReturn(PETSC_SUCCESS);
1016: }

1018: /*@C
1019:   PetscBagGetNames - Get the names of all entries in the bag

1021:   Not Collective

1023:   Input Parameter:
1024: . bag - the bag of values

1026:   Output Parameter:
1027: . names - array of char pointers for names

1029:   Level: intermediate

1031: .seealso: `PetscBag`, `PetscBagGetName()`, `PetscBagSetName()`, `PetscBagCreate()`, `PetscBagGetData()`
1032:           `PetscBagRegisterReal()`, `PetscBagRegisterInt()`, `PetscBagRegisterBool()`, `PetscBagRegisterScalar()`, `PetscBagRegisterEnum()`
1033: @*/
1034: PetscErrorCode PetscBagGetNames(PetscBag bag, const char *names[])
1035: {
1036:   PetscBagItem nitem = bag->bagitems;

1038:   PetscFunctionBegin;
1039:   PetscAssertPointer(bag, 1);
1040:   PetscAssertPointer(names, 2);
1041:   for (PetscInt n = 0; nitem; ++n, nitem = nitem->next) names[n] = nitem->name;
1042:   PetscFunctionReturn(PETSC_SUCCESS);
1043: }