|
MCS Preprints
(numbered 1000-1499) |
|
The following preprints are listed in numerical order. For more
information, please contact Judy Beumer at beumer@mcs.anl.gov.
| 1000 |
1100 | 1200 | 1300 | 1400
|
|
| 1000-1099 |
|
|
|
| P1001.pdf |
C. Liu, L. YANG, I. Foster, D. Angulo, "Design and Evaluation of a Resource Selection Framework for
Grid Applications," Proc. Int'l Symp. on High-Performance Distributed
Computing (HPDC-11), Edinburgh, July 2002. Also Preprint ANL/MCS-P1001-1002,
October 2002. |
|
|
| P1002.pdf |
M. Anitescu and G. D. Hart, "A
Constraint Stabilized Time-Stepping Approach for Multibody Dynamics with
Contact and Small Friction," Int. J. Numer. Meth. Engng 60
(2004), pp. 2335-2371. Also Preprint ANL/MCS-P1002-1002, October
2002. |
|
|
| P1004.pdf |
G. X. Yu and E. Marland,
"Establishment of a Knowledge Base for Function Annotations in
High-Throughput Sequence Analysis," Preprint ANL/MCS-P1004-1002,
October 2002. |
|
|
| P1007.pdf |
R. Thakur and W. Gropp,
"Improving the Performance of MPI Collective Communication on
Switched Networks," Preprint ANL/MCS-P1007-1102, November 2002. |
|
|
| P1008.pdf |
J. M. Restrepo and G. K. Leaf,
"Noise Effects on Wave-Generated Transport Induced by Ideal
Waves," J. Physical Oceanography 32 (2002), pp.
2334-2349. Also Preprint ANL/MCS-P1008-0102, Jan. 2002. |
|
|
| P1009.pdf |
K. Amin, S. Nijsure, and G. von
Laszewski, "Open Collaborative Grid Service Architecture (OCGSA),"
Preprint ANL/MCS-P1009-1102, Nov. 2002. |
|
|
| P1010.pdf |
M. Vilayannur, R. B. Ross, P. H.
Carns, R. Thakur, A. Sivasubramaniam, and M. Kandemir, "Improving the
Performance of the POSIX I/O Interface to PVFS," Preprint ANL/MCS-P1010-1102,
Nov. 2002. |
|
|
| P1011.pdf |
J. N. Lyness and G. Monegato,
"Asymptotic Expansions for Two-Dimensional Hypersingular
Integrals," Preprint ANL/MCS-P1011-1102, November 2002. |
| |
|
|
P1012.pdf |
J. N. Lyness and T. Sorevik,
"Four-Dimensional Lattice Rules Generated by Skew-Circulant Matrices,"
Preprint ANL/MCS-P1012-0702, July 2002. |
| |
|
| P1013.pdf |
J. N. Lyness, "Notes on
Lattice Rules," Journal of Complexity (to appear). Also
Preprint ANL/MCS-P1013-1102, November 2002. |
|
|
| P1014.pdf |
L. Wos, "Double-Negation
Elimination in Some Propositional Logics," Studia Logica (to
appear). Also Preprint ANL/MCS-P1014-1202, December 2002. |
|
|
| P1015.pdf |
M. P. Friedlander and M. A.
Saunders, "A Globally Convergent Linearly Constrained Lagrangian
Method for Nonlinear Optimization," SIAM J. Optimization 15(3)
(2005), pp. 863-897. Also Preprint ANL/MCS-P1015-1202,
December 2002. |
|
|
| P1016.pdf |
G. von Laszewski, J. Gawor, S.
Krishnan, and K. Jackson, "Commodity Grid Kits - Middleware for
Building Grid Computing Environments," Preprint ANL/MCS-P1016-0103,
January 2003. |
|
|
| P1017.pdf |
J. J. Evans, S. Baik, C. S. Hood,
W. Gropp, "Toward Understanding Soft Faults in High Performance
Cluster Networks," Preprint ANL/MCS-P1017-0103, Jan. 2003. |
| |
|
|
P1020.pdf |
U. Naumann, "Statement-Level
Optimality of Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1020-0103,
January 2003. |
| |
|
| P1022.pdf |
U. Naumann and P. Heimbach,
"Coupling Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1022-0203,
June 2003. |
|
|
| P1023.pdf |
M. Anitescu, A. Miller, G. D. Hart,
"Constraint Stabilization for Time-Stepping Approaches for Rigid
Multibody Dynamics with Joints, Contact, and Friction, Proc. DETC'03 (to
appear). Also Preprint ANL/MCS-P1023-0403, April 2003. |
|
|
| P1024.pdf |
V. Welch, F. Siebenlist, I. Foster,
J. Bresnahan, K. Czajkowski, J. Gawor, C. Kesselman, S. Meder, L. Pearlman,
S. Tuecke, "Security for Grid Services," Preprint ANL/MCS-P1024-0203,
February 2003. |
|
|
| P1026.pdf |
S. Leyffer, "Mathematical
Programs with Complementarity Constraints," Preprint ANL/MCS-P1026-0203,
February 2003. |
|
|
| P1027.pdf |
S. Bhowmick, L. McInnes, B. Norris,
P. Raghavan, "The Role of Multimethod Linear Solvers in PDE-Based
Simulations," Preprint ANL/MCS-P1027-0203, Feburary 2003. |
|
|
| P1028.pdf |
P. Hovland, K. Keahey, L. C.
McInnes, B. Norris, L. Freitag, P. Raghavan, "A Quality-of-Service
Architecture for High-Performance Numerical Components," Preprint ANL/MCS-P1028-0203,
February 2003. |
|
|
| P1029.pdf |
A. Rodriguez, D. Sulakhe, E.
Marland, V. Nefedova, G. X. Yu, and N. Maltsev, "GADU - Genome
Analysis and Database Update Pipeline," Preprint ANL/MCS-P1029-0203,
February 2003. |
|
|
| P1030.pdf |
N. T. Karonis, M. E. Papka, J.
Binns, J. Bresnahan, J. A. Insley, D. Jones, J. M. Link,
"High-Resolution Remote Rendering of Large Datasets in a
Collaborative Environment," Future Generation Computer Systems 19
(2003), 909-917. Also Preprint ANL/MCS-P1030-0203, February
2003. |
|
|
| P1032.pdf |
U. Naumann and P. Gottschling,
"Simulated Annealing for Optimal Pivot Selection in Jacobian
Accumulation," to appear in Proceedings of Second Symp. on
Stochastic Algorithms, Foundation and Applications, Hatfield, UK, Springer
(LNCS). Also Preprint ANL/MCS-P1032-0303, March 2003. |
|
|
| P1033.pdf |
S. Vazhkudai and J. M. Schopf,
"Using Regression Techniques to Predict Large Data Transfers,"
The International Journal of High Performance Computing Applications (IJHPCA),
special issue on Grid Computing: Infrastructure and Applications, vol. 17,
No. 3, August 2003. Also Preprint ANL/MCS-P1033-0303, March 2003. |
|
|
| P1034.pdf |
M. Anitescu, "A Fixed
Time-Step Approach for Multibody Dynamics with Contact and Friction,"
Preprint ANL/MCS-P1034-0303, March 2003. |
|
|
| P1035.pdf |
W. Allcock, J. Bresnahan, J. Bunn, S. Hedge, J. Insley, R.
Kettimuthu, H. Newman, S. Ravot, T. Rimovsky, C. Steenberg, L. Winkler,
"Grid-Enables Particle Physics Event Analysis: Experiences Using a 10
Gb, High-Latency Network for a High-Energy Physics Application," Future
Generation Computer Systems 19(6) (2003), pp. 983-997.
Also Preprint ANL/MCS-P1035-0303, March 2003. |
|
|
| P1036.pdf |
A. Grimshaw and S. Tuecke,
"Grid Services Extend Web Services," Web Services Journal
(to appear. Aug. 2003). Also Preprint ANL/MCS-P1036-0303, March
2003. |
|
|
| P1037.pdf |
L. A. Freitag and R. M. Loy,
"Theoretical Cost Comparison of Remote Visualization
Strategies," Preprint ANL/MCS-P1037-0303, March 2003. |
|
|
| P1038.pdf |
R. Thakur and W. Gropp,
"Improving the Performance of Collective Operations in MPICH,"
Preprint ANL/MCS-P1038-0403, April 2003. |
|
|
| P1039.pdf |
O. S. Matlin and W. McCune,
"Encapsulation for Practical Simplification Procedures,"
Preprint ANL/MCS-P1039-0403, April 2003. |
|
|
| P1040.pdf |
X. Zhang, J. Freschl, and J. M.
Schopf, "A Performance Study of Monitoring and Information Services
for Distributed Systems," Preprint ANL/MCS-P1040-0403, April 2003. |
|
|
| P1041.pdf |
I. Lee, P. Raghavan, S. Schofield,
and P. Fischer, "An O(n log n) Solution
Algorithm for Spectral Element Methods," Preprint ANL/MCS-P1041-0403,
April 2003. |
|
|
| P1042.pdf |
L. Pearlman, V. Welch, I. Foster,
C. Kesselman, and S. Tuecke, "A Community Authorization Service for
Group Collaboration," Preprint ANL/MCS-P1042-0502, May 2002. |
|
|
| P1045.pdf |
S. Byna, W. Gropp, X.-H. Sun, R.
Thakur, "Improving the Performance of MPI Derived Datatypes by
Optimizing Memory-Access Cost," Preprint ANL/MCS-P1045-0403, April
2003. |
|
|
| P1046.pdf |
S. Anand, S. Yoginath, G. von
Laszewski, B. Alunkal, X.-H. Sun, "Flow-based Multistage
Co-allocation Service," Preprint ANL/MCS-P1046.0403, April 2003. |
|
|
| P1047.pdf |
G. von Laszewski, B. Alunkal, J.
Gawor, R. Madduri, P. Plaszczak, Xian-He Sun, "A File Transfer
Component for Grids," Preprint ANL/MCS-P1047-0403, April 2003. |
|
|
| P1048.pdf |
J. Li, W.-K. Liao, A. Choudhary, R.
Ross, R. Thakur, W. Gropp, R. Latham, "Parallel netCDF: A Scientific
High-Performance I/O Interface," Preprint ANL/MCS-P1048-0503, May
2003. |
|
|
| P1049.pdf |
M. Grimsditch, G. K. Leaf, H. G.
Kaper, D. A. Karpeev, R. E. Camley, "Normal Modes of Spin Exictations
in Magnetic Nano-Particles," Preprint ANL/MCS-P1049-0503, May 2003. |
|
|
| P1050.pdf |
A. Zagaris, H. G. Kaper, T. J.
Kaper, "Analysis of the Computational Singular Perturbation Reduction Method for Chemical
Kinetics," J. of Nonlinear Sci. 14(1) (Jan./Feb. 2004),
pp. 59-91. Also Preprint ANL/MCS-P1050-0503, May 2003. |
|
|
| P1052.pdf |
J. W. Lottes and P. F. Fischer,
"Hybrid Multigrid/Schwarz Algorithms for the Spectral Element
Method," J. Sci. Comput. 24 (2005), pp. 45-78.
Also Preprint ANL/MCS-P1052-0403, April 2003. |
|
|
| P1053.pdf |
K. Keahey, V. Welch, S. Lang, B.
Liu, S. Meder, "Fine-Grain Authorization Policies in the GRID: Design
and Implementation," Concurrency Comput.: Pract. Exper. 16
(2004), pp. 477-488. Also Preprint ANL/MCS-P1053-0603, June 2003. |
| |
|
|
P1054.pdf |
S. Leyffer, "Complementarity
Constraints as Nonlinear Equations: Theory and Numerical Experience,"
Preprint ANL/MCS-P1054-0603, June 2003. |
| |
|
| P1055.pdf |
S. J. Benson and T. S. Munson,
"Flexible Complementarity Solvers for Large-Scale Applications,"
Optimization Methods and Software 21, no. 1 (2006), pp.
155-168. Also Preprint ANL/MCS-P1055-0603, June 2003. |
|
|
| P1056.pdf |
L. Pearlman, C. Kesselman, V.
Welch, I. Foster, S. Tuecke, "The Community Authorization Service:
Status and Future," Preprint ANL/MCS-P1056-0603, June 2003. |
|
|
| P1057.pdf |
M. R. Paul, K.-H. Chiam, M. C.
Cross, P. F. Fischer, and H. S. Greenside, "Pattern Formation and
Dynamics in Rayleigh-Bénard Convection: Numerical Simulations of
Experimentally Realistic Geometries," Preprint ANL/MCS-P1057-0603,
June 2003. |
|
|
| P1058.pdf |
O. F. Rana, A. Shaikhali, and G.
von Laszewski, "Creating and Managing Grid Services," in Grid
Computing: A Practical Guide to Technology and Applications, ed. Ahmar
Abbas, Charles River Media, 2003. Also Preprint ANL/MCS-P1058-0603,
June 2003. |
|
|
| P1064.pdf |
R. Stevens, M. E. Papka, and T.
Disz, "The Access Grid: Prototyping - Workspaces of the Future,"
Preprint ANL/MCS-P1064-0603, June 2003. |
|
|
| P1065.pdf |
S. Newhouse, J. MacLaren, and K.
Keahey, "Trading Grid Services within the UK e-Science Grid," in
Grid Resource Management, edited by J. Nabrzyski, J. M. Schopf, and
J. Weglarz, Kluwer Academic Publishers, chapter 29, 2003. Also
Preprint ANL/MCS-P1065-0603, June 2003. |
|
|
| P1066.pdf |
U. Naumann, "Statement-Level
Optimality of Tangent-Linear and Adjoint Models," Preprint ANL/MCS-P1066-0603,
June 2003. |
|
|
| P1068.pdf |
R. Ross, N. Miller, and W. Gropp,
"Implementing Fast and Resuable Datatype Processing," Proc.
EuroPVM/MPI 2003, Venice, Sept. 2003. Also Preprint ANL/MCS-P1068-0603, July 2003. |
|
|
| P1069.pdf |
L. Yang, J. M. Schopf, and I.
Foster, "Conservative Scheduling: Using Predicted Variance to Improve
Scheduling Decisions in Dynamic Environments," Preprint ANL/MCS-P1069-0703,
July 2003. |
|
|
| P1071.pdf |
J. J. Evans, C. S. Hood, W. D. Gropp, "Exploring the Relationship
Between Parallel Application Run-Time Variability and Network Performance in
Clusters," Preprint ANL/MCS-P1071-0703,
July 2003. |
|
|
| P1072.pdf |
M. Hereld, "Local Methods for
Measuring Tiled Display Alignment," Preprint ANL/MCS-P1072-0803,
August 2003. |
|
|
| P1073.pdf |
U. Naumann and J. Utke,
"Reduction of Edge Labeled DAGs through Constant Folding,"
Preprint ANL/MCS-P1073-0803, September 2003. |
|
|
| P1074.pdf |
Y. Zhou, "Eigenvalue
Computation from the Optimization Perspective: On Jacobi-Davidson, IIGD,
RQI, and Newton Updates," Preprint ANL/MCS-P1074-0803, August 2003. |
|
|
| P1075.pdf |
I. Foster and C. Kesselman,
"The Grid in a Nutshell," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap. 1
(to appear). Preprint ANL/MCS-P1075-0803, August 2003. |
|
|
| P1076.pdf |
J. M. Schopf, "Ten Actions
When Grid Scheduling," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
2 (to appear). Also Preprint ANL/MCS-P1076-0803, August 2003. |
|
|
| P1077.pdf |
H. Dail, O. Sievert, F. Berman, H.
Casanova, A. YarKhan, S. Vadhiyar, J. Dongarra, C. Liu, L. Yang, D. Angulo,
and I. Foster, "Scheduling in the Grid Application Development
Software Project," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
6 (to appear). Also Preprint ANL/MCS-P1077-0803, August 2003. |
|
|
| P1078.pdf |
K. Czajkowski, I. Foster, C.
Kesselman, and S. Tuecke, "Grid Service Level Agreements,"
in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
8 (to appear). Also Preprint ANL/MCS-P1078-0803, August 2003. |
|
|
| P1079.pdf |
B. Nitzberg, J. M. Schopf, and J.
P. Jones, "PBS Pro: Grid Computing and Scheduling
Attributes," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
13 (to appear). Also Preprint ANL/MCS-P1079-0803, August 2003. |
|
|
| P1080.pdf |
J. M. Schopf and L. Yang,
"Using Predicted Variance for Conservative Scheduling on Shared
Resources," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
15 (to appear). Also Preprint ANL/MCS-P1080-0803, August 2003. |
|
|
| P1081.pdf |
K. Ranganathan and I. Foster,
"Computation Scheduling and Data Replication Algorithms for Data
Grids," in Grid
Resource Management, eds. J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap.
22
(to appear). Also Preprint ANL/MCS-P1082-0803, August 2003. |
|
|
| P1082.pdf |
A. Iamnitchi and I. Foster, "A
Peer-to-Peer Approach to Resource Location in Grid
Environments," in Grid Resource Management, eds.
J. Nabrzyski, J. M. Schopf, and J. Weglarz, Kluwer Academic, Chap. 25 (to appear).
Also Preprint ANL/MCS-P1082-0803, August 2003. |
|
|
| P1083.pdf |
G. G. Maisuradze, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Interpolating Moving Least Squares
Methods for Fitting Potential Energy Surfaces: Detailed Analysis of
One-Dimensional Applications," J. Chem. Phys. 119(19)
(Nov. 15, 2003), pp. 10002-10014. Also Preprint ANL/MCS-P1083-0803, August
2003. |
|
|
| P1084.pdf |
S. Benson, M. Krishnan, L. McInnes,
J. Nieplocha, J. Sarich, "Using the GA and TAO Toolkits for Solving
Large-Scale Optimization Problems on Parallel Computers," Preprint
ANL/MCS-P1084-0903, September 2003. |
|
|
| P1085.pdf |
A. Ching, A. Choudhary, K. Coloma,
W.-K. Liao, R. Ross, and W. Gropp, "Noncontiguous I/O Accesses
Through MPI-IO," Preprint ANL/MCS-P1085-0903, September 2003. |
|
|
| P1087.pdf |
W. McCune, R. Padmanabhan, M. A.
Rose, and R. Veroff, "Short Equational Bases for Ortholattices,"
Preprint ANL/MCS-P1087-0903, September 2003. |
|
|
| P1088.pdf |
B.-D. Lee and J. M. Schopf,
"Run-Time Prediction of Parallel Applications on Shared
Environment," Preprint ANL/MCS-P1088-0903, September 2003. |
|
|
| P1089.pdf |
N. Desai, A. Lusk, R. Bradshaw, R.
Evard, "BCFG: A Configuration Management Tool for Heterogeneous
Environments," Preprint ANL/MCS-P1089-0903, Sept. 2003. |
|
|
| P1090.pdf |
U. Naumann and J. Riehme, "A
Differentiation-Enabled Fortran 95 Compiler," ACM Trans. Math.
Software 31(4) (2005), pp. 458-474. Also Preprint ANL/MCS-P1090-0903,
Sept. 2003. |
|
|
| P1091.pdf |
S. Leyffer, "The Penalty
Interior-Point Method Fails to Converge," Preprint ANL/MCS-P1091-0903,
September 2003. |
|
|
| P1092.pdf |
R. Padmanabhan and W. McCune,
"Tarski Theorems on Self-Dual Equational Bases for Groups,"
Preprint ANL/MCS-P1092-0903, August 2004. |
|
|
| P1093.pdf |
M. Anitescu, W. J. Layton, F.
Pahlevani, "Unconditional Stability for Numerical Scheme Combining
Implicit Timestepping for Local Effects and Explicit Timestepping for
Nonlocal Effects," Preprint ANL/MCS-P1093-0903, September 2003. |
|
|
| P1094.pdf |
K. Keahey, V. Welch, S. Lang, B.
Liu, and S. Meder, "Fine-Grained Authorization for Job Execution in
the Grid: Design and Implementation," Preprint ANL/MCS-P1094-0903,
September 2003. |
|
|
| P1095.pdf |
M. R. Thompson, A. Essiari, K.
Keahey, V. Welch, S. Lang, and B. Liu, "Fine-Grained Authorization
for Job and Resource Management Using Akenti and the Globus Toolkit,"
Preprint ANL/MCS-P1095-0903, September 2003. |
|
|
| P1096.pdf |
K. Keahey, M. Ripeanu, and K.
Doering, "Dynamic Creation and Management of Runtime Environments in
the Grid," Preprint ANL/MCS-P1096-0903, September 2003. |
|
|
| P1098.pdf |
G. von Laszewski, K. Amin, M.
Hategan, N. J. Zaluzec, S. Hampton, A. Rossi, "GridAnt: A
Client-Controllable Grid Workflow System," Preprint ANL/MCS-P1098-1003,
October 2003. |
|
|
| P1099.pdf |
G. D. Hart and M. Anitescu, "A
Hard-Constraint Time-Stepping Approach for Rigid Multibody Dynamics with
Joints, Contact, and Friction," Preprint ANL/MCS-OP1099-1003, October
2003. |
|
|
| 1100-1199 |
|
|
|
|
P1100.pdf |
S. Lang and S. Meder, "Security and
Credential Management on the Grid," ClusterWorld 1(2) (Jan.
2004), pp. 8-11. Also Preprint ANL/MCS-P1100-1003, October 2003. |
| |
|
| P1101.pdf |
K. Amin, M. Hategan, G. von
Laszewski, N. J. Zaluzec, "Abstracting the Grid," Preprint ANL/MCS-P1101-1003,
October 2003. |
|
|
| P1103.pdf |
J. Liu, W. Jiang, P. Wyckoff, D. K.
Panda, D. Ashton, D. Buntinas, W. Gropp, B. Toonen, "Design and
Implementation of MPICH2 over InfiniBand with RDMA Support," Preprint
ANL/MCS-P1103-1003, October 2003. |
|
|
| P1104.pdf |
L. Randerson, J. Burruss, E.
Feibush, S. Flanagan, K. Keahey, C. Ludescher, D. C. McCune, Q. Peng, D.
P. Schissel, and M. R. Thompson, "Building Application Services on
the Grid: The National Fusion Collaboratory," Preprint ANL/MCS-P1104-1103,
November 2003. |
| |
|
|
P1105.pdf |
K. Amin, G. von Laszewski, and A.
R. Mikler, "Grid Computing for the Masses: An Overview," Preprint ANL/MCS-P1105-1103,
November 2003. |
| |
|
| P1106.pdf |
T. Özgökmen, P. Fischer, J. Duan,
and T. Iliescu, "Three-Dimensional Turbulent Bottom Density Currents
from a High-Order Nondydrostatic Spectral Element Model," Preprint
ANL/MCS-P1106-1103, Nov. 2003. |
|
|
| P1107.pdf |
P. Moon, G. Sandí, R. Kizilel, and
D. Stevens, "Computational Simulation of Lithium Ion Transport
through Polymer Nanocomposite Membranes," Journal of New Materials
for Electrochmeical Systems 6 (2003), pp. 191-195. Also
Preprint ANL/MCS-P1107-0903, Sept. 2003. |
|
|
| P1108.pdf |
R. Al-Ali, K. Amin, G. von
Laszewski, O. Nana, and D. Walker, "An OGSA-based Quality of Service
Framework," Preprint ANL/MCS-P1108-1103, November 2003. |
|
|
| P1111.pdf |
P. J. Moon, G. Sandí, D. Stevens,
and R. Kizilel, "Computational Modeling of Ionic Transport in
Continuous and Batch Electrodialysis," Preprint ANL/MCS-P1111-1203,
December 2003. |
|
|
| P1112.pdf |
J.-S. Pang and S. Leyffer, "On
the Global Minimization of the Value-at-Risk," Optimization
Methods and Software 19(5) (2004), pp. 611-631.
Also Preprint ANL/MCS-P1112-1203,
December 2003. |
|
|
| P1114.pdf |
A. Zagaris, H. G. Kaper, and T. J.
Kaper, "Fast and Slow Dynamics for the Computational Singular
Perturbation Method," SIAM J. Multiscale Model. Simul. 2
(2004), pp. 613-638. Also Preprint ANL/MCS-P1114-0104, January 2004. |
|
|
| P1115.pdf |
X. Zhang and J. M. Schopf,
"Performance Analysis of the Globus Toolkit Monitoring and Discovery
Service, MDS2," Preprint ANL/MCS-P1115-0104, January 2004. |
|
|
| P1116.pdf |
M. Grimsditch, L. Giovannini, F.
Montoncello,, F. Nizzoli, G. K. Leaf, and H. G. Kaper, "Normal Modes
in Ferromagnetic Nanoparticles: A Dynamical Matrix Approach,"
Preprint ANL/MCS-P1116-0104, January 2004. |
|
|
| P1117.pdf |
A. A. Dunca, "Optimal Design
of Fluid Flow Using Subproblems Reduced by Large Eddy Simulation,"
Preprint ANL/MCS-P1117-1003, Oct. 2003. |
| |
|
| P1118.pdf |
H. Gao, I. R. Judson, T. Uram, T.
L. Disz, M. E. Papka, and R. L. Stevens, "Capability Matching of Data
Streams with Network Services," Preprint ANL/MCS-P1118-0104, January
2004. |
|
|
| P1119.pdf |
W. Jiang, J. Liu, H.-W. Jin, D. K.
Panda, W. Gropp, and R. Thakur, "High Performance MPI-2 Onbe-Sided
Communication over InfiniBand," Preprint ANL/MCS-P1119-0104, January
2004. |
|
|
| P1120.pdf |
P. M. Lyster, J. Guo,
T. Clune, and J. W. Larson, "The Computational Complexity and
Parallel Scalability of Atmospheric Data Assimilation
Algorithms," Journal
of Atmospheric and Oceanic Technology, 21, No. 11 (2004), pp.
1689-1700. Also Preprint ANL/MCS-P1120-0104, January 2004. |
|
|
| P1121.pdf |
W. Yu, D. Buntinas, R. L. Graham,
and D. K. Panda, "Efficient and Scalable Barrier over Quadrics and
Myrinet with a New NIC-based Collective Message Passing Protocol,"
Preprint ANL/MCS-P1121-0204, February 2004. |
|
|
| P1122.pdf |
J. Wu, P. Wyckoff, D. Panda, and R.
Ross, "Unifier: Unifying Cache Management for PVFS over InfiniBand,"
Preprint ANL/MCS-P1122-0204, February 2004. |
| |
|
|
P1123.pdf |
P. M. Dickens and J. W. Larson,
"Classifiers for the Causes of Data Loss Using Packet-Loss Signatures,"
Preprint ANL/MCS-P1123-0204, February 2004. |
| |
|
| P1125.pdf |
A. Ching, A. Choudhary, W.-K. Liao,
R. Ross, W. Gropp, "Evaluating Structured I/O Methods for Parallel
File Systems," IJHPCN 2(2/3/4), (2004), pp. 133-145.
Also Preprint ANL/MCS-P1125-0204, February 2004. |
|
|
| P1126.pdf |
G. von Laszewski, J. Gawor, P.
Plaszczak, M. Hategan, K. Amin, R. Madduri, S. Gose, S. Shankar, "An
Overview of Grid File Transfer Patterns and Their Implementation in the
Java CoG Kit," J. of Neural Parallel and Scientific Computations
12(3), (2004), pp. 329-352. Also Preprint ANL/MCS-P1126-1203, February 2004. |
| |
|
|
P1127.pdf |
B. K. Alunkal, I. Veljkovic, G. von
Laszewski, and K. Amin, "Reputation-Based Grid Resource Selection," Preprint
ANL/MCS-P1127-1203, December 2003. |
| |
|
|
P1128.pdf |
G. von Laszewzki, B. K. Alunkal,
and I. Veljkovic, "Toward Reputable Grids," Preprint ANL/MCS-P1128-1203,
December 2003. |
| |
|
| P1129.pdf |
R. Al-Ali, G. von Laszewski, K.
Amin, M. Hategan, O. Rana, D. Walker, N. Zaluzec, "QoS Support for
High-Performance Scientific Grid Applications," Preprint ANL/MCS-P1129-0204,
February 2004. |
|
|
| P1130.pdf |
W. Allcock, J. Bresnahan, R.
Kettimuthu, J. Link, "The Globus eXtensible Input/Output System (XIO):
A protocol independent IO system for the Grid," Preprint ANL/MCS-P1130-0204,
February 2004. |
|
|
| P1131.pdf |
B. Norris, J. Ray, R. Armstrong, L.
C. McInnes, D. E. Bernholdt, W. R. Elwasif, A. D. Malony, and S. Shende,
"Computational Quality of Service for Scientific Components,"
Preprint ANL/MCS-P1131-0304, March 2004. |
|
|
| P1132.pdf |
V. Welch, I. Foster, C. Kesselman,
O. Mulmo, L. Pearlman, S. Tuecke, J. Gawor, S. Meder, and F. Siebenlist,
"X.509 Proxy Certificates for Dynamic Delegation," Preprint ANL/MCS-P1132-0204,
February 2004. |
|
|
| P1133.pdf |
D. P. Schissel, K. Keahey, T.
Araki, J. R. Burruss, E. Feibush, S. M. Flanagan, T.
W. Fredian, M. J. Greenwald, S. A. Klasky, T. Leggett, K. Li, D. C. McCune,
P. Lane, M. E. Papka, Q. Peng, L. Randerson, A. Sanderson, J. Stillerman, M.
R. Thompson, and G. Wallace, "The National Fusion Collaboratory Project:
Applying Grid Technology for Magnetic Fusion Research," Preprint ANL/MCS-P1133-0304,
March 2004. |
|
|
| P1134.pdf |
T. Munson, "An Averaging
Method for Nash Games with Shared Decision Variables," Preprint ANL/MCS-P1134-0304,
March 2004. |
| |
|
|
P1136.pdf |
T. Munson, "Mesh Shape-Quality
Optimization Using the Inverse Mean-Ratio Metric," Preprint ANL/MCS-P1136-0304,
March 2004. |
| |
|
| P1137.pdf |
A. Kawano, Y. Gao, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Improving the Accuracy of Interpolated
Potential Energy Surfaces by Using an Analytical Zeroth-Order Potential
Function," Journal of Chemical Physics 120, No. 14
(2004), pp. 6414-6422. Also Preprint ANL/MCS-P1137-0304, March 2004. |
| |
|
|
P1138.pdf |
Y. Zhou, R. Shepard, and M. Minkoff,
"Computing Eigenvalue Bounds for Iterative Subspace Matrix Methods,"
Preprint ANL/MCS-P1138-0304, march 2004. |
| |
|
| P1139.pdf |
K. Keahey, M. E. Papka, Q. Peng, D.
Schissel, G. Abla, T. Araki, J. Burruss, S. Feibush, P. Lane, S. Klasky,
T. Leggett, D. McCune, and L. Randerson, "Grids for Experimental
Science: The Virtual Control Room," Preprint ANL/MCS-P1139-0304,
March 2004. |
|
|
| P1140.pdf |
R. Thakur, R. Rabenseifner, W.
Gropp, "Optimization of Collective Communication Operations in MPICH,"
Preprint ANL/MCS-P1140-0304, March 2004. |
|
|
| P1141.pdf |
K. Keahey, K. Doering, and I.
Foster, "From Sandbox to Playground: Dynamic Virtual Environments in the
Grid," Preprint ANL/MCS-P1141-0304, March 2004. |
|
|
| P1142.pdf |
K. Keahey, T. Araki, and P. Lane,
"Agreement-Based Interactions for Experimental Science,"
Preprint ANL/MCS-P1142-0304, March 2004. |
|
|
| P1143.pdf |
M. Anitescu, "Global
Convergence of an Elastic Mode Approach for a Class of Mathematical
Programs with Complementarity Constraints," Preprint ANL/MCS-P1143-0404,
April 2004. |
|
|
| P1144.pdf |
M. R. Paul, K-H. Chiam, M. C.
Cross, and P. F. Fischer, "Rayleigh-Bénard Convection in
Large-Aspect-Ratio Domains," Preprint ANL/MCS-P1144-0404, April 2004. |
|
|
| P1145.pdf |
U. Naumann, J. Utke, A. Lyons, and
M. Fagan, "Control Flow Reversal for Adjoint Code Generation," Preprint
ANL/MCS-P1145-0404, April 2004. |
|
|
| P1146.pdf |
L. Wos, "Milestones for
Automated Reasoning," International Journal on Artificial
Intelligence Tools 15, No. 1 (2006), pp. 3-19. Also Preprint ANL/MCS-P1146-0404, April 2004. |
|
|
| P1147.pdf |
M. Hereld, R. L. Stevens, W. van
Drongelen, H. C. Lee, "Developing a Petascale Neural
Simulation," Preprint ANL/MCS-P1147-0404, April 2004. |
|
|
| P1148.pdf |
J. P. Kenny, S. J. Benson, Y.
Alexeev, J. Sarich, C. L. Janssen, L. C. McInnes, M. Krishnan, J.
Nieplocha, E. Jurrus, C. Fahlstrom, and T. L. Windus,
"Component-Based Integration of Chemistry and Optimization
Software," J. Comput. Chem. 25, No. 24 (2004), pp. 1717-1725.
Also Preprint ANL/MCS-P1148-0404, April 2004. |
|
|
| P1149.pdf |
N. Desai, R. Bradshaw, and E. Lusk,
"Component-Based Cluster Systems Software Architecture: A Case
Study," Preprint ANL/MCS-P1149-0404, April 2004. |
|
|
| P1150.pdf |
A.-V. Demiguel, M. P. Friedlander,
F. J. Nogales, and S. Scholtes, "An Interior-Point Method for MPECs
Based on Strictly Feasible Relaxations," SIAM J. Optimization
16(2) (2005), pp. 587-609. Title in SIAM journal was changed to
"A Two-Sided Relaxation Scheme for Mathematical Programs with Equilibrium
Constraints." Also Preprint ANL/MCS-P1150-0404,
April 2004. |
| |
|
|
P1151.pdf |
N. T. Karonis, M. E. Papka, J.
Binns, J. Bresnahan, and J. M. Link, "Effective Use of Dedicated Wide-Area
Networks for High-Performance Distributed Computing," Preprint ANL/MCS-P1151-0404,
April 2004. |
| |
|
| P1152.pdf |
C. H. Bischof, P. D. Hovland, and
B. Norris, "On the Implementation of Automatic Differentiation
Tools," Preprint ANL/MCS-P1152-0404, April 2004. |
| |
|
|
P1153.pdf |
S. L. Lee and P. D. Hovland,
"Derivative Techniques for Forward Sensitivity Analysis in Time-Dependent
Problems," Preprint ANL/MCS-P1153-0404, April 2004. |
| |
|
|
P1154.pdf |
W. Gropp and E. Lusk, "Fault
Tolerance in MPI Programs," Preprint ANL/MCS-P1154-0404, April 2004. |
| |
|
| P1155.pdf |
E. D. Dolan, J. J. Moré, and T. S.
Munson, "Optimality Measures for Performance Profiles," SIAM
J. Optimization 16(3) (2006), pp. 891-909. Also Preprint ANL/MCS-P1155-0504, May 2004. |
|
|
| P1156.pdf |
G. von Laszewski, G. W. Pieper, and
P. Wagstrom, "Gestalt of the Grid," in Performance Evaluation
and Characterization of Parallel and Distributed Computing Tools, eds.
S. Hariri and M. Parashar, Chapter 6, John Wiley & Sons, Inc. (to
appear). Also Preprint ANL/MCS-P1156-0504, April 2004. |
|
|
| P1157.pdf |
J. Peng, M. Anitescu, and S. Akella,
"Optimal Control of Multiple Robot Systems with Friction using MPCC,"
Preprint ANL/MCS-P1157-0404, April 2004. |
|
|
| P1158.pdf |
R. Thakur, W. Gropp, and B. Toonen,
"Minimizing Synchronization Overhead in the Implementation of MPI
One-Sided Communication," Preprint ANL/MCS-P1158-0504, May 2004. |
|
|
| P1159.pdf |
L. F. Diachin, P. Knupp, T. Munson,
and S. Shontz, "A Comparison of Inexact Newton and Coordinate Descent
Mesh Optimization Techniques," Preprint ANL/MCS-P1159-0504, May 2004. |
|
|
| P1160.pdf |
N. Desai, R. Bradshaw, A. Lusk, and
E. Lusk, "MPI Cluster System Software," in Recent Advances in
Parallel Virtual Machine and Message Passing Interface, Proc. 2004
EuroPVM/MPI, Budapest, Sept. 14-15, 2004 (to appear). Also Preprint
ANL/MCS-P1160-0504, May 2004. |
|
|
| P1161.pdf |
M. Anitescu,
"Optimization-Based Simulation of Nonsmooth Rigid Multibody
Dynamics," Preprint ANL/MCS-P1161-0504, May 2004. |
|
|
| P1162.pdf |
F. A. Potra, M. Anitescu, B. Gavrea,
and J. Trinkle, "A Linearly Implicit Trapezoidal Method for
Integrating Stiff Multibody Dynamics with Contact, Joints, and
Friction," Preprint ANL/MCS-P1162-0504, May 2004. |
| |
|
|
P1163.pdf |
U. Naumann, J. Utke, and A. Lyons,
"Control Flow Reversal for Adjoint Code Generation," Preprint ANL/MCS-P1163-0504,
May 2004. |
| |
|
| P1164.pdf |
W. Jiang, J. Liu, H.-W. Jin, D. K.
Panda, D. Buntinas, R. Thakur, and W. Gropp, "Efficient
Implementation of MPI-2 Passive One-Sided Communication on InfiniBand
Clusters," Preprint ANL/MCS-P1164-0504, May 2004. |
|
|
| P1165.pdf |
T. Bae, A. K. Banger, A. Wallace,
E. M. Glass, F. Aslund, O. Schneewind, D. M. Missiakas,
"Staphylococcus Aureus Virulence Genes Identified by Bursa Aurealis
Mutagenesis and Nematode Killing," Proc. Natl. Acad. Sci. U.S.A., 101(33),
12312-317, August 17, 2004. Also Preprint ANL/MCS-P1165-0604, June
2004. |
| |
|
|
P1166.pdf |
W. E. Allcock, I. Foster, and R.
Madduri, "Reliable Data Transport: A Critical Service for the Grid,"
Preprint ANL/MCS-P1166-0604, June 2004. |
| |
|
|
P1167.pdf |
M. M. Strout and P. D. Hovland,
"Metric and Models for Reordering Transformations," Preprint ANL/MCS-P1167-0604,
June 2004. |
| |
|
| P1168.pdf |
R. Kettimuthu and W. Allcock,
"Improved Selective Acknowledgment Scheme for TCP," Preprint ANL/MCS-P1168-0604,
June 2004. |
| |
|
|
P1169.pdf |
R. Overbeek, T. Disz, and R.
Stevens, "A Peer-to-Peer Environment for Annotation of Genomes: The SEED,"
Preprint ANL/MCS-P1169-0604, June 2004. |
| |
|
| P1170.pdf |
W. van Drongelen, H. C. Lee, M.
Hereld, D. Jones, M. Cohoon, F. Elsen, M. E. Papka, R. L. Stevens,
"Simulation of Neocortical Epileptiform Activity Using Parallel
Computing," Neurocomputing 58-60 (2004), pp.
1203-1209. Also Preprint ANL/MCS-P1170-0604, June 2004. |
| |
|
|
P1171.pdf |
W. van Drongelen, H. C. Lee, M.
Hereld, Z. Chen, F. P. Elsen, and R. L. Stevens, "Emergent Epileptiform
Activity in Neural Networks with Weak Excitatory Synapses," IEEE
Trans. Neural Syst. Rehab. Eng. 13(2) (2005), pp. 236-241.
Also Preprint ANL/MCS-P1171-0604,
June 2004. |
| |
|
| P1172.pdf |
W. van Drongelen, H. C. Lee, H.
Koch, F. Elsen, M. S. Carroll, M. Hereld, R. L. Stevens, "Interaction
between Cellular Voltage-Sensitive Conductance and Network Parameters in a
Model of the Neocortex Can Generate Epileptiform Bursting," Preprint
ANL/MCS-P1172-0604, June 2004. |
|
|
| P1173.pdf |
C. E. Frouzakis, A. G. Tomboulides,
P. Papas, P. F. Fischer, R. M. Rais, P. A. Monkewitz, and K. Boulouchos,
"Three-Dimensional Numerical Simulations of Cellular Jet Diffusion
Flames," presented at Combustion Institute, Chicago, IL, June 25-30,
2004. Also Preprint ANL/MCS-P1173-0604, June 2004. |
|
|
| P1174.pdf |
W. Ligon and R. Ross,
"Parallel I/O and the Parallel Virtual File System," in Beowulf
Cluster Computing with Linux, second edition, edited by W. Gropp, E. Lusk,
and T. Sterling, Cambridge, MA (2003), pp. 493-534. Also Preprint
ANL/MCS-P1174-0504, May 2004. |
|
|
| P1175.pdf |
S. J. Benson, L. McInnes, J. J.
Moré, and J. Sarich, "Scalable Algorithms in Optimization:
Computational Experiments," Preprint ANL/MCS-P1175-0604, June 2004. |
|
|
| P1176.pdf |
J. Lee, X. Ma, R. Ross, R. Thakur,
M. Winslett, "RFS: Efficient and Flexible Remote File Access for MPI-IO,"
Preprint ANL/MCS-P1176-0604, June 2004. |
|
|
| P1177.pdf |
W. Yu, D. Buntinas, and D. K.
Panda, "Scalable and High Performance NIC-Based All-to-All Broadcast
Over Myrinet/GM," Preprint ANL/MCS-P1177-0604, June 2004. |
| |
|
|
P1178.pdf |
W. Gropp, R. Ross, and N. Miller,
"Providing Efficient I/O Redundancy in MPI Environments," Preprint ANL/MCS-P1178-0604,
June 2004. |
| |
|
|
P1179.pdf |
L. C. McInnes, B. A. Allan, R.
Armstrong, S. J. Benson, D. E. Bernholdt, T. L. Dahlgren, L. F. Diachin, M.
Krishnan, J. A. Kohl, J. W. Larson, S. Lefantzi, J. Nieplocha, B. Norris, S.
G. Parker, J. Ray, and S. Zhou, "Parallel PDE-Based Simulations Using the
Common Component Architecture," Preprint ANL/MCS-P1179-0704, July 2004. |
| |
|
|
P1180.pdf |
H. Zhang, K. Keahey, and W. Allcock,
"Providing Data Transfer with QoS as Agreement-Based Service," Preprint ANL/MCS-P1180-0704,
July 2004. |
| |
|
| P1182.pdf |
R. Latham, R. Ross, and R. Thakur,
"The Impact of File Systems on MPI-IO Scalability," Preprint ANL/MCS-P1182-0604,
June 2004. |
|
|
| P1183.pdf |
G. Almási, C. Archer, J. G.
Castańos, J. Gunnels, C. C. Erway, P. Heidelberger, X. Martorell, J. E.
Moreira, K. Pinnow, J. Ratterman, B. Steinmacher-burow, W. Gropp, and B.
Toonen, "The Design and Implementation of Message Passing Services
for the BlueGene/L Supercomputer," Preprint ANL/MCS-P1183-0604, June
2004. |
|
|
| P1185.pdf |
T. Araki, "Autonomic WWW
Server Management with Distributed Resources," Preprint ANL/MCS-P1185-0704,
July 2004. |
|
|
| P1186.pdf |
J. N. Lyness, "A Prototype
Four-Dimensional Galerkin-Type Integral," RIMS (Kyoto Univ.)
41 (2005), pp. 843-851. Also Preprint ANL/MCS-P1186-0604,
June 2004. |
|
|
| P1187.pdf |
G. G. Maisuradze, A. Kawano, D. L.
Thompson, A. F. Wagner, and M. Minkoff, "Interpolating Moving
Least-Squares Methods for Fitting Potential Energy Surfaces: Analysis of
an Application to a Six-Dimensional System," Preprint ANL/MCS-P1187-0704,
July 2004. |
|
|
| P1188.pdf |
Y. Guo, A. Kawano, D. L. Thompson,
A. F. Wagner, and M. Minkoff, "Interpolating Moving Least-Squares
Methods for Fitting Potential Energy Surfaces: Applications to Classical
Dynamics Calculations," Preprint ANL/MCS-P1188-0704, July 2004. |
|
|
|
P1190.pdf |
B. Addis and S. Leyffer, "A
Trust-Region Algorithm for Global Optimization," Preprint ANL/MCS-P1190-0804,
August 2004. |
| |
|
| P1191.pdf |
Y. Chen, B. F. Hobbs, S. Leyffer,
and T. S. Munson, "Leader-Follower Equilibria for Electric Power and
NOx Allowances Markets," Preprint ANL/MCS-P1191-0804,
August 2004. |
|
|
| P1192.pdf |
R. Padmanabhan, W. McCune, and R.
Veroff, "Levi's Commutator Theorems for Cancellative Semigroups,"
Semigroup Forum 71 (2005), pp. 152-175. Also Preprint
ANL/MCS-P1192-0804, August 2004. |
|
|
| P1193.pdf |
W. D. Gropp, "Issues in
Accurate and Reliable Use of Parallel Computing in Numerical
Programs," Preprint ANL/MCS-P1193-0804, August 2004. |
|
|
| P1194.pdf |
U. Naumann and J. Utke,
"Optimality-Preserving Elimination of Linearities in Jacobian
Accumulation," Preprint ANL/MCS-P1194-0904, September 2004. |
|
|
|
P1195.pdf |
Y. Zhao, M. Wilde, I. Foster, J.
Voeckler, T. Joran, E. Quigg, and J. Dobson, "Grid Middleware Services for
Virtual Data Discovery, Composition, and Integration," Preprint ANL/MCS-P1195-0904,
September 2004. |
|
|
| P1196.pdf |
J. Utke, "Flattening Basic
Blocks," Preprint ANL/MCS-P1196-0904, September 2004. |
|
|
| P1197.pdf |
G.-X. Yu, E. Marland, N. T. Karonis,
and N. Maltsev, "A Knowledge-Based Voting Algorithm for Automated
Protein Fucntional Annotation," Preprint ANL/MCS-P1197-0904,
September 2004. |
|
|
| P1198.pdf |
N. Maltsev, E. M. Glass, G.
Ovchinnikova, and Z. Gu, "Molecular Mechanisms Involved in Robustness
of Yeast Central Metabolism Against Null Mutations," Preprint ANL/MCS-P1198-0904,
September 2004. |
|
|
|
P1199.pdf |
G.-X. Yu, E. M. Glass, N. T.
Karonis, N. Maltsev, "A Knowledge-Based Voting Algorithm for Automated
Protein Functional Annotation," Preprint ANL/MCS-P1199-0904, September 2004. |
|
|
| 1200-1299 |
|
|
|
| P1200.pdf |
S. Son, B. Allcock, and M. Livny,
"CODO: Firewall Traversal by Cooperative On-Demand Opening,"
Preprint ANL/MCS-P1200-1004, October 2004. |
|
|
| P1201.pdf |
K. Keahey, M. E. Papka, Q. Peng, D.
Schissel, G. Abla, T. Araki, J. Burruss, E. Feibush, P. Lane, S. Klasky,
T. Leggett, D. McCune, L. Randerson, "Grid Support for Collaborative
Control Room in Fusion Science," Preprint ANL/MCS-P1201-1004, October
2004. |
|
|
| P1202.pdf |
M. S. Min, T. W. Lee, P. F.
Fischer, and S. K. Gray, "Fourier Spectral Simulations and Gegenbauer
Reconstructions for Electromagnetic Waves in the Presence of a Metal
Nanoparticle," Preprint ANL/MCS-P1202-1004, October 2004. |
|
|
| P1204.pdf |
K. Amin, G. von Laszewski, A. R.
Mikler, "Toward an Architecture for Ad Hoc Grids," Preprint ANL/MCS-P1204-1004,
October 2004. |
|
|
| P1205.pdf |
A. Majumder and R. Stevens,
"Perceptual Photometric Seamlessness in Projection-Based Tiled
Displays," To appear in ACM Transactions on Graphics.
Also Preprint ANL/MCS-P1205-1104, November 2004. |
|
|
| P1206.pdf |
P. H. Beckman, "Building the
TeraGrid," Preprint ANL/MCS-P1206-1104, November 2004. |
|
|
|
P1207.pdf |
A. Zagaris, H. G. Kaper, and T. J.
Kaper, "Two Perspectives on Reduction of Ordinary Differential Equations,"
Preprint ANL/MCS-P1207-1104, November 2004. |
|
|
| P1208.pdf |
J. Larson, R. Jacob, and E. Ong,
"The Model Coupling Toolkit: A New Fortran90 Toolkit for Building
Multiphysics Parallel Coupled Models," Inter. J. High Perform.
Comput. Appl. 19, no. 3 (2005), pp. 277-292. Also Preprint ANL/MCS-P1208-1204,
December 2004. |
|
|
| P1209.pdf |
R. Kettimuthu, V. Subramani, S.
Srinivasan, T. Gopalsamy, D. K. Panda, and P. Sadayappan, "Selective
Preemption Strategies for Parallel Job Scheduling," Preprint ANL/MCS-P1209-1204,
December 2004. |
|
|
| P1210.pdf |
Y. K. Kuan, P. F. Fischer, F. Loth,
"Surface Reconstruction of In Vivo Geometry Base on Medical
Images using Multilevel Radial Basis Functions," Preprint ANL/MCS-P1210-0904,
September 2004. |
|
|
| P1211.pdf |
S. Leyffer, G. López-Calva, and J.
Nocedal, "Interior Methods for Mathematical Programs with
Complementarity Constraints," Preprint ANL/MCS-P1211-1204, December
2004. |
|
|
|
P1212.pdf |
P. F. Fischer, G. K. Leaf, and J.
M. Restrepo, "Influence of Wall Proximity on the Lift and Drag of a Particle
in an Oswcillatory Flow," Preprint ANL/MCS-P1212-1204, December 2004. |
|
|
| P1213.pdf |
P. F. Fischer and C. P. Tzanos,
"Filtered Simulations of Turbulence in a Reactor Rod Bundle
Flow," Preprint ANL/MCS-P1213-0105, January 2005. |
|
|
| P1216.pdf |
G. von Laszewski and M. Sosonkin,
"A Grid Certificate Authority for Community and Ad-hoc Grids,"
Preprint ANL/MCS-P1216-0105, January 2005. |
|
|
| P1218.pdf |
W. McCune, R. Padmanabhan, M. A.
Rose, and R. Veroff, "Automated Discovery of Single Axioms for
Ortholattices," Algebra Universalis 52 (2004),
pp. 541-549. Also Preprint ANL/MCS-P1218-0105, January 2005. |
|
|
| P1219.pdf |
N. Desai, A. Lusk, R. Bradshaw, and
E. Lusk, "MPISH: A Parallel Shell for MPI Programs," Preprint
ANL/CMS-P1219-0105, January 2005. |
|
|
|
P1220.pdf |
M. M. Strout, B. Kreaseck, and P.
Hovland, "Data-Flow Analysis for MPI Programs," Preprint ANL/MCS-P1220-0105,
January 2005. |
|
|
| P1221.pdf |
B. Norris and I. Veljkovic,
"Performance Monitoring and Analysis Components in Adaptive PDE-Based
Simulations," Preprint ANL/MCS-P1221-0105, January 2005. |
|
|
| P1222.pdf |
A. P. Craig, R. L. Jacob, B.
Kauffman, T. Bettge, J. Larson, E. Ong, C. Ding, Y. He, "Cp16: The
New Extensible, High-Performance Parallel Coupler for the Community
Climate System Model," Preprint ANL/MCS-P1222-0205, February 2005. |
|
|
| P1223.pdf |
A. Zagaris, H. G. Kaper, T. J.
Kaper, "Two Perspectives on Reduction of Ordinary Differential
Equations," Preprint ANL/MCS-P1223-0205, February 2005. |
|
|
|
P1224.pdf |
E. Lusk, N. Desai, R. Bradshaw, A.
Lusk, R. Butler, "An Interoperability Approach to System Software, Tools,
and Libraries for Clusters," Preprint ANL/MCS-P1224-0205, February 2005. |
|
|
| P1225.pdf |
R. Jacob, J. Larson, and E. Ong,
"MxN Communication and Parallel Interpolation in CCSM3 Using the
Model Coupling Toolkit," Preprint ANL/MCS-P1225-0205, February 2005. |
|
|
| P1226.pdf |
U. Naumann and J. Utke,
"Source Templates for the Automatic Generation of Adjoint Code
through Static Call Graph Reversal," Preprint ANL/MCS-P1226-0205,
February 2005. |
|
|
| P1227.pdf |
D. Sulakhe, A. Rodriguez, M.
D'Souza, M. Wilde, V. Nefedova, I. Foster, N. Maltsev, "GNARE: An
Environment for Grid-Based High-Throughput Genome Analysis," Proc.
CCGRID05, IEEE, pp. 455-462, 2005. Also Preprint ANL/MCS-P1227-0205, February 2005. |
|
|
|
P1228.pdf |
H. Lee, M. Hereld, R. Stevens, and
W. van Drongelen, "Epileptiform Activity Patterns in Coupled Neuronal
Networks," Preprint ANL/MCS-P1224-0205, February 2005. |
|
|
|
P1229.pdf |
M. Hereld, R. Stevens, J. Teller,
W. van Drongelen, H. Lee, "Large Neural Simulations on Large Parallel
Computers," Preprint ANL/MCS-P1229-0205, February 2005. |
|
|
|
P1230.pdf |
J. Utke, U. Naumann, M. Fagan, N.
Tallent, M. Strout, P. Heimbach, C. Hill, and C. Wunsch, "OpenAD/F: A
Modular, Open-Source Tool for Automatic Differentiation of Fortran Codes,"
Preprint ANL/MCS-P1230-0205, February 2005. |
|
|
|
P1231.pdf |
K. Keahey, I. Foster, T. Freeman,
X. Zhang, and D. Galron, "Virtual Workspaces in the Grid," Preprint ANL/MCS-P1231-0205,
February 2005. |
|
|
| P1232.pdf |
R. Thakur, W. Gropp, B. Toonen,
"Optimizing the Synchronization Operations in MPI One-Sided
Communication," Preprint ANL/MCS-P1232-0205, February 2005. |
|
|
|
P1233.pdf |
M. Min, "Discontinuous Galerkin
Method Based on Quadrilateral Mesh for Maxwell's Equations," Preprint ANL/MCS-P1233-0205,
February 2005. |
|
|
|
P1234.pdf |
L. Yang, J. M. Schopf, I. Foster,
"Improving Parallel Data Transfer Times Using Predicted Variances in Shared
Networks," Preprint ANL/MCS-P1234-0305, March 2005. |
|
|
| P1235.pdf |
R. Ross, R. Latham, W. Gropp, R.
Thakur, B. Toonen, "Implementing MPI-IO Atomic Mode Without File
System Support," Preprint ANL/MCS-P1235-0305, March 2005. |
|
|
| P1236.pdf |
H. G. Kaper and S. Tipei, "DISSCO:
A Unified Approach to Sound Synthesis and Composition," Preprint ANL/MCS-P1236-0305,
March 2005. |
|
|
| P1237.pdf |
M. Hereld and R. L. Stevens,
"Pixel-Aligned Warping for Multi-Projector Tiled Displays,"
Preprint ANL/MCS-P1237-0305, March 2005. |
|
|
|
P1238.pdf |
T. Disz, M. Kubal, R. Olson, R.
Overbeek, and R. Stevens, "Challenges in Large Scale Distributed Computing:
Bioinformatics," Preprint ANL/MCS-P1238-0305, March 2005. |
|
|
| P1239.pdf |
L. F. Diachin, P. Knupp, T. Munson,
S. Shontz, "A Comparison of Two Optimization Methods for Mesh Quality
Improvement," Preprint ANL/MCS-P1239-0305, March 2005. |
|
|
|
P1240.pdf |
L. Yang, J. M. Schopf, I. Foster,
"Improving Parallel Data Transfer Times Using Predicted Variances in Shared
Networks," Preprint ANL/MCS-P1240-0305, March 2005. |
|
|
|
P1241.pdf |
J. N. Lyness, "Extrapolation
Expansions for Hanging-Chad-Type Galerkin Integrals with Plane Triangular
Elements," Preprint ANL/MCS-P1241-0305, March 2005. |
|
|
| P1242.pdf |
M. Anitescu, P. Tseng, S. Wright,
"Elastic-Mode Algorithms for Mathematical Programs with Equilibrium
Constraints: Global Convergence and Stationarity Properties,"
Preprint ANL/MCS-P1242-0405, April 2005. |
|
|
| P1243.pdf |
S. Leyffer and T. Munson,
"Solving Multi-Leader-Follower Games," Preprint ANL/MCS-P1243-0405,
April 2005. |
|
|
|
P1244.pdf |
J. N. Lyness and T. Sorevik,
"Five-Dimensional K-Optimal Lattice Rules," Preprint ANL/MCS-P1244-0105,
January 2005. |
|
|
|
P1245.pdf |
D. Rosenberg, A. Fournier, P.
Fischer, and N. Pouquet, "Geophysical-Astrophysical Spectral-Element
Adaptive Refinement (GASpAR): Object-oriented h-adaptive code for
geophysical fluid dynamics simulation," Preprint ANL/MCS-P1245-0405, April
2005. |
|
|
|
P1247.pdf |
M. Anitescu, "Mathematical Programs
with Equilibrium Constraints and Applications to Control," Preprint ANL/MCS-P1247-0405,
April 2005. |
|
|
|
P1248.pdf |
J. M. Schopf, M. D'Arcy, N. Miller,
L. Pearlman, I. Foster, C. Kesselman, "Monitoring and Discovery in a Web
Services Framework: Functionality and Performance of the Globus Toolkit's
MDS4," Preprint ANL/MCS-P1248-0405, April 2005. |
|
|
|
P1249.pdf |
I. Foster, "Service-Oriented
Science," Preprint ANL/MCS-P1249-0405, April 2005. |
|
|
|
P1250.pdf |
K. Amin, G. von Laszewski, M.
Hategan, R. Al-Ali, O. Rana, and D. Walker, "An Abstraction Model for a Grid
Execution Framework," Preprint ANL/MCS-P1250-0405, April 2005. |
|
|
|
P1251.pdf |
M. Anitescu and W. J. Layton,
"Sensitivities in Large Eddy Simulation and Improved Estimates of Turbulent
Flow Functionals," SIAM J. Sci. Comput. 29, no. 4 (2007),
pp. 1650-1667. Also Preprint ANL/MCS-P1251-0505, May 2005. |
|
|
|
P1253.pdf |
G. von Laszewski, "The Grid-Idea
and Its Evolution," Preprint ANL/MCS-P1253-0505, May 2005. |
|
|
|
P1254.pdf |
C. S. Verma, P. F. Fischer, S. E.
Lee, and F. Loth, "An All-Hex Meshing Strategy for Bifurcation Geometries in
Vascular Flow Simulation," Preprint ANL/MCS-P1254-0505, May 2005. |
|
|
|
P1255.pdf |
M. M. Strout, J. Mellor-Drummey,
and Paul Hovland, "Representation-Independent Program Analysis," Preprint
ANL/MCS-P1255-0605, June 2005. |
|
|
|
P1256.pdf |
G. von Laszewski, D. Kodeboyina, "A
Repository Service for Grid Workflow Components," Preprint ANL/MCS-P1256-0605,
June 2005. |
|
|
|
P1257.pdf |
K. Amin, G. von Laszewski, and A.
R. Mikler, "Quality Assured Ad Hoc Grids," Preprint ANL/MCS-P1257-0605, June
2005. |
|
|
|
P1258.pdf |
D. E. Stewart and M. Anitescu,
"Optimal Control of Systems with Discontinuous Differential Equations,"
Preprint ANL/MCS-P1258-0605, June 2005. |
|
|
|
P1259.pdf |
G. von Laszewski and M. Hategan, "Workflow
Concepts of the Java CoG Kit," J. of Grid Comput. 3, nos.
3-4, September 2005. Also Preprint ANL/MCS-P1259-0605, June 2005. |
| |
|
|
P1260.pdf |
T. Munson, "Optimizing the Quality
of Mesh Elements," Preprint ANL/MCS-P1260-0605, June 2005. |
|
|
|
P1261.pdf |
Y. Zhao, M. Wilde, I. Foster, J.
Voeckler, J. Dobson, T. Jordan, and E. Quigg, "Virtual Data Grid Middleware
Services for Data-Intensive Science," Preprint ANL/MCS-P1261-0605, June
2005. |
|
|
|
P1262.pdf |
R. Ross, R. Thakur, and A.
Choudhary, "Achievements and Challenges for I/O in Computational Science,"
Journal of Physics: Conference Series 16 (2005), pp. 501-509.
Also Preprint ANL/MCS-P1262-0605, June 2005. |
|
|
|
P1263.pdf |
H. Zhang, B. Smith, M. Sternberg,
and P. Zapol, "SIPs: Shift-and-Invert Parallel Spectral Transformations,"
ACM TOMS 33, No. 2 (2007), pp. 1-19. Also Preprint ANL/MCS-P1263-0605, June 2005. |
|
|
|
P1264.pdf |
P. D. Hovland, B. Norris, M. M.
Strout, S. Bhowmick, and J. Utke, "Sensitivity Analysis and Design
Optimization through Automatic Differentiation," Preprint ANL/MCS-P1264-0605,
June 2005. |
|
|
|
P1265.pdf |
L. Wos and M. Spinks, "The Arrival
of Automated Reasoning," Preprint ANL/MCS-P1265-0605, June 2005. |
|
|
|
P1266.pdf |
W. Gropp and R. Thakur, "An
Evaluation of Implementation Options for MPI One-Sided Communication,"
Preprint ANL/MCS-P1266-0605, June 2005. |
|
|
|
P1267.pdf |
R. Thakur, R. Ross, and R. Latham,
"Implementing Byte-Range Locks Using MPI One-Sided Communication," Preprint
ANL/MCS-P1267-0605, June 2005. |
|
|
|
P1268.pdf |
P. F. Fischer, "Anisotropic
Diffusion in a Toroidal Geometry," J. Phys. Conf. Series
(2005), pp. 446-455. Also Preprint ANL/MCS-P1268-0605, June 2005. |
|
|
|
P1269.pdf |
N. Desai, E. Lusk, R. Bradshaw,
"MPISH2: Unix Integration for MPI Programs," Preprint ANL/MCS-P1269-0705,
July 2005. |
|
|
|
P1270.pdf |
D. Buntinas and W. Gropp,
"Designing a Common Communication Subsystem," Preprint ANL/MCS-P1270-0705,
July 2005. |
|
|
|
P1272.pdf |
R. Latham, R. Ross, R. Thakur, B.
Toonen, "Implementing MPI-IO Shared File Pointers without File System
Support," Preprint ANL/MCS-P1272-0705, July 2005. |
|
|
|
P1273.pdf |
C. Falzone, A. Chan, E. Lusk, and
W. Gropp, "Collective Error Detection for MPI Collective Operations,"
Preprint ANL/MCS-P1273-0705, July 2005. |
|
|
|
P1274.pdf |
B. Allcock, A. Chervenak, I.
Foster, C. Kesselman, M. Livny, "Data Grid Tools: Enabling Science on Big
Distributed DAta," Preprint ANL/MCS-P1274-0705, July 2005. |
|
|
|
P1275.pdf |
W. Allcock, J. Bresnahan, R.
Kettimuthu, M. Link, C. Dumitrescu, I. Raicu, I. Foster, "The Globus Striped
GridFTP Framework and Server," Preprint ANL/MCS-P1275-0705, July 2005. |
|
|
|
P1276.pdf |
B. Norris, "Software Architecture
Issues in Scientific Component Development," Preprint ANL/MCS-P1276-0705,
July 2005. |
|
|
|
P1277.pdf |
S. Leyffer, "The Return of the
Active Set Method," Preprint ANL/MCS-P1277-0805, August 2005. |
|
|
|
P1278.pdf |
D. Negrut, R. Rampalli, G.
Ottarsson, A. Sajdak, "On the Use of the HHT Method in the Context of Index
3 Differential Algebraic Equations of Multibody Dynamics," Preprint ANL/MCS-P1278-0805,
August 2005. |
|
|
|
P1279.pdf |
S. Bhowmick, D. Kaushik, L. McInnes,
B. Norris, P. Raghavan, "Parallel Adaptive Solvers in Compressible
PETSc-FUN3D Simulations," Preprint ANL/MCS-P1279-0805, August 2005. |
|
|
|
P1280.pdf |
D. Negrut, M. Anitescu, T. Munson,
and P. Zapol, "Simulating Nanoscale Processes in Solids Using DFT and the
Quasicontinuum Method," Preprint ANL/MCS-P1280-0805, August 2005. |
|
|
|
P1281.pdf |
L. Yang, J. M. Schopf, C. L.
Dumitrescu, and I. Foster, "Statistical Data Reduction for Efficient
Application Performance Monitoring," Preprint ANL/MCS-P1281-0805, August
2005. |
|
|
|
P1282.pdf |
J. G. Kim, E. C. Hunke, and W. H.
Lipscomb, "A Sensitivity Analysis and Parameter Tuning Scheme for Global Sea
Ice Modeling," Preprint ANL/MCS-P1282-0805, August 2005. |
|
|
|
P1283.pdf |
L. McInnes, B. Norris, I. Veljkovic,
"Computational Quality of Service in Parallel CFD," Preprint ANL/MCS-P1283-0805,
August 2005. |
|
|
|
P1284.pdf |
T. S. Munson and P. D. Hovland,
"The FeasNewt Benchmark," Preprint ANL/MCS-P1284-0805, August 2005. |
|
|
|
P1285.pdf |
W. E. Allcock, "Programming with
the Globus Toolkit GridFTP Client Library," Preprint ANL/MCS-P1285-0705,
July 2005. |
|
|
|
P1286.pdf |
K. Amin, G. von Laszewski, M.
Sosonkin, A. R. Mikler, M. Hategan, "Ad Hoc Grid Security Infrastructure,"
Preprint ANL/MCS-P1286-0905, September 2005. |
|
|
|
P1287.pdf |
R. Padmanabhan, W. McCune, and R.
Veroff, "Lattice Laws Forcing Distributivity Under Unique Complementation,"
Preprint ANL/MCS-P1287-0905, September 2005. |
|
|
|
P1288.pdf |
N. Desai, R. Bradshaw, S. Matott,
S. Bittner, S. Coghlan, R. Evard, C. Lueninghoener, T. Leggett, J.-P.
Navarro, G. Rackow, C. Stacey, and T. Stacey, "A Case Study in Configuration
Management Tool Deployment," Preprint ANL/MCS-P1288-0905, September 2005. |
|
|
|
P1289.pdf |
S. J. Benson and Y. Ye, "DSDP5:
Software for Semidefinite Programming," Preprint ANL/MCS-P1289-0905,
September 2005. |
|
|
|
P1290.pdf |
S. Leyffer, "A Note on
Multiobjective Optimization and Complementarity Constraints," Preprint ANL/MCS-P1290-0905,
September 2005. |
|
|
|
P1291.pdf |
I. Foster, V. Nefedova, L. Liming,
R. Ananthakrishnan, R. Madduri, L. Pearlman, O. Mulmo, M. Ahsant,
"Streamlining Grid Operations: Definition and Deployment of a Portal-based
User Registration Service," Preprint ANL/MCS-P1291-0905, September 2005. |
|
|
|
P1292.pdf |
S. J. Benson, "Parallel
Semidefinite Programming and Combinatorial Optimization," Preprint ANL/MCS-P1292-0905,
September 2005. |
|
|
|
P1293.pdf |
M. Yan, G. Leaf, H. Kaper, R.
Camley, and M. Grimsditch, "Spin Wave Modes in a Cobalt Square Vortex,"
Preprint ANL/MCS-P1293-1005, October 2005. |
|
|
|
P1294.pdf |
X. Zhang, J. L. Freschl, and J. M.
Schopf, "Scalability Analysis of Three Monitoring and Information Systems:
MDS2, R-GMA, and Hawkeye," Preprint ANL/MCS-P1294-1005, October 2005. |
|
|
|
P1295.pdf |
M. G. Knepley and D. A. Karpeev,
"Flexible Representation of Computational Meshes," Preprint ANL/MCS-P1295-1005,
October 2005. |
|
|
|
P1296.pdf |
N. Maltsev, E. Glass, D. Sulakhe,
A. Rodriguez, M. H. Syed, T. Bompada, Y. Zhang, and M. D'Souza, "PUMA2 -
Grid-Based High-Throughput Analysis of Genomes and Metabolic Pathways,"
Nucleic Acids Research 34 (2006), pp. D369-D372. Also Preprint ANL/MCS-P1296-1005, October 2005. |
|
|
|
P1299.pdf |
G. Leaf, H. Kaper, M. Yan, V.
Novosad, P. Vavassori, R. E. Camely, and M. Grimsditch, "Dynamic Origin of
Stripe Domains," Preprint ANL/MCS-P1299-1005, October 2005. |
|
|
| 1300-1399 |
|
| |
|
|
P1303.pdf |
M. Anitescu, D. Negrut, P. Zapol,
A. El-Azab, "A Note on the Regularity of Reduced Models Obtained by
Quasi-continuum-like Approaches," Preprint ANL/MCS-P1303-1105, November
2005. |
| |
|
|
P1304.pdf |
J. Lee, R. Ross, S. Atchley, M.
Beck, R. Thakur, "MPI-IO/L: Efficient Remote I/O for MPI-IO via Logistical
Networking," Preprint ANL/MCS-P1304-1105, November 2005. |
| |
|
|
P1306.pdf |
D. Buntinas, G. Mercier, and W.
Gropp, "Data Transfers Between Processes in SMP System: Performance Study
and Application to MPI," Preprint ANL/MCS-P1306-1105, November 2005. |
| |
|
|
P1308.pdf |
L. Meyer, J. Annis, Mike Wilde,
Marta Mattoso, and I. Foster, "Planning Spatial Workflows to Optimize Grid
Performance," Preprint ANL/MCS-P1308-1105, November 2005. |
| |
|
|
P1309.pdf |
S. S. Varghese, S. H. Frankel, and
P. F. Fischer, "Direct Numerical Simulation of Stenotic Flows. Part 1.
Steady Flow," Preprint ANL/MCS-P1309-1105, November 2005. |
| |
|
|
P1310.pdf |
S. S. Varghese, S. H. Frankel, and
P. F. Fischer, "Direct Numerical Simulation of Stenotic Flows. Part 2.
Pulsatile flow," Preprint ANL/MCS-P1310-1105, November 2005. |
| |
|
|
P1311.pdf |
P. Hovland, B. Norris, J. Utke, M.
M. Strout, "Term Graphs for Imperative Programming Languages," Preprint ANL/MCS-P1311-0106,
January 2006. |
| |
|
|
P1312.pdf |
B. Kreaseck, L. Ramos, S. Easterday,
M. Strout, P. Hovland, "Hybrid Static/Dynamic Activity Analysis," Preprint
ANL/MCS-P1312-0106, January 2006. |
| |
|
|
P1313.pdf |
M. M. Strout and P. Hovland,
"Linearity Analysis for Automatic Differentiation," Preprint ANL/MCS-P1313-0106,
January 2006. |
| |
|
|
P1314.pdf |
S. Bhowmick and P. Hovland, "A
Polynomial Time Algorithm for the Detection of Axial Symmetry in Directed
Acyclic Graphs," Preprint ANL/MCS-P1314-0106, January 2006. |
| |
|
|
P1315.pdf |
J. M. Schopf, I. Raicu, L.
Pearlman, N. Miller, C. Kesselman, I. Foster, M. D'Arcy, "Monitoring and
Discovery in a Web Services Framework: Functionality and Performance of
Globus Toolkit MDS4," Preprint ANL/MCS-P1315-0106, January 2006. |
| |
|
|
P1316.pdf |
K. Keahey, I. Foster, T. Freeman,
A. Rana, B. Sotomayor, F. Wurthwein, "Division of Labor: Tools for Growth
and Scalability of Grids," Preprint ANL/MCS-P1316-0106, January 2006. |
| |
|
|
P1317.pdf |
K. Keahey, J. Chase, and I. Foster,
"Virtual Playgrounds: Managing Virtual Resources in the Grid," Preprint ANL/MCS-P13176-0106,
January 2006. |
| |
|
|
P1318.pdf |
I. Foster, K. Keahey, C. Kesselman,
E. Laure, M. Livny, S. Martin, M. Rynge, G. Singh, "Embedding
Community-Specific Resource Managers in General-Purpose Grid
Infrastructure," Preprint ANL/MCS-P1318-0106, January 2006. |
| |
|
|
P1319.pdf |
I. R. Judson, E. Olson, S. D.
Price, T. D. Uram, "Web Services Toolkit Interoperability," Preprint ANL/MCS-P1319-0106,
January 2006. |
| |
|
|
P1320.pdf |
S. Leyffer, "Complementarity
Constraints as Nonlinear Equations: Theory and Numerical Experience,"
Optimization and Multivalued Mappings, S. Dempe and V. Kalashnikov,
eds., Springer (to appear). Also Preprint ANL/MCS-P1320-0206, February
2006. |
| |
|
|
P1322.pdf |
M. Hereld, M. E. Papka, J. Binns,
and R. L. Stevens, "CupHolder: A Multi-Person Interactive High-Resolution
Workstation," Preprint ANL/MCS-P1322-0206, February 2006. |
| |
|
|
P1323.pdf |
J. P. Allain, M. Nieto, A.
Hassanein, V. Titov, P. Plotkin, M. Hendricks, E. Hinson, C. Chrobak, M. H.
L. van der Velden, and B. Rice, "Effect of Charged-Particle Bombardment on
Collector Mirror Reflectivity in EUV Lithography Devices," Preprint ANL/MCS-P1323-0206,
February 2006. |
| |
|
|
P1324.pdf |
B. Lang, I. Foster, F. Siebenlist,
R. Ananthakrishnan, T. Freeman, "A Multipolicy Authorization Framework for
Grid Security," Preprint ANL/MCS-P1324-0206, February 2006. |
| |
|
|
P1325.pdf |
D. Sulakhe, A. Rodriguez, M. Wilde,
I. Foster, and N. Maltsev, "Using Multiple Grid Resources for Bioinformatics
Applications in GADU," Preprint ANL/MCS-P1325-0206, February 2006. |
| |
|
|
P1326.pdf |
L. C. McInnes, J. Ray, R.
Armstrong, T. L. Dahlgren, A. Malony, B. Norris, S. Shende, J. P. Kenny, and
J. Steensland, "Computational Quality of Service for Scientific CCA
Applications: Composition, Substitution, and Reconfiguration," Preprint ANL/MCS-P1326-0206,
February 2006. |
| |
|
|
P1327.pdf |
P. Fischer, F. Loth, S.-W. Lee, D.
Smith, H. Tufo, and H. Bassiouny, "Parallel Simulation of High Reynolds
Number Vascular Flows," Preprint ANL/MCS-P1327-0206, February 2006. |
| |
|
|
P1328.pdf |
B. Lang, I. Foster, F. Siebenlist,
R. Ananthakrishnan, and T. Freeman, "A Multipolicy Authorization Framework
for Grid Security," Proc. Fifth IEEE Symposium on Network Computing and
Application, pp. 269-272, Cambridge, USA, July 24-26, 2006. Also
Preprint ANL/MCS-P1328-0206, February 2006. |
| |
|
|
P1329.pdf |
E. M. Glass, M. D'Souza, A.
Rodriguez, D. Sulakhe, M. Syed, and N. Maltsev, "Pathos and PathoGene
Databases - Support for Biodefense and Emerging Infectious Disease
Research," Preprint ANL/MCS-P1329-0306, March 2006. |
| |
|
|
P1330.pdf |
D. Sulakhe, M. D'Souza, M. Syed, A.
Rodriguez, Y. Zhang, E. M. Glass, M. F. Romine, and N. Maltsev, "GNARE - A
Grid-Based Server for the Analysis of User Submitted Genomes," Preprint ANL/MCS-P1330-0306,
March 2006. |
| |
|
|
P1331.pdf |
T. Freeman, K. Keahey, B. Sotomayor,
X. Zhang, I. Foster, and D. Scheftner "Virtual Clusters for Grid
Communities," Preprint ANL/MCS-P1331-0306,
March 2006. |
| |
|
|
P1332.pdf |
P. Beckman, K. Iskra, K. Yoshii,
and S. Coghlan, "Operating System Issues for Petascale Systems,"
ACM SIGOPS Operating Systems Review 40(2) (2006), pp. 29-33.
Also Preprint ANL/MCS-P1332-0306, March 2006. |
| |
|
|
P1333.pdf |
M. Yan, G. Leaf, H. Kaper, V.
Novosad, P. Vavassori, R. E. Camley, and M. Grimsditch, "Stripe Domains,
Dynamic Modes, and Magnetic Phase Transitions," Preprint ANL/MCS-P1333-0306,
March 2006. |
| |
|
|
P1334.pdf |
J. Binns, J. DiCarlo, J. A. Insley,
T. Leggett, C. Lueninghoener, J.-P. Navarro, and M. E. Papka, "Enabling
Community Access to TeraGrid Visualization Resources," Preprint ANL/MCS-P1334-0306,
March 2006. |
| |
|
|
P1335.pdf |
T. Lee and P. Fischer, "Eliminating
Parasitic Currents in the Lattice Boltzmann Equation Method for Nonideal
Gases," Preprint ANL/MCS-P1335-0306, March 2006. |
| |
|
|
P1337.pdf |
P. F. Fischer, F. Loth, S. E. Lee,
S.-W. Lee, D. S. Smith, and H. S. Bassiouny, "Simulation of High Reynolds
Number Vascular Flows," Preprint ANL/MCS-P1337-0306, March 2006. |
| |
|
|
P1338.pdf |
M. Nieto, J. P. Allain, V. Titov,
M. R. Hendricks, A. Hassanein, D. Rokusek, C. Chrobak, C. Tarrio, Y. Barad,
S. Grantham, T. Lucatorto, and B. Rice, "Effect of Xenon Bombardment of
Ruthenium-Coated Grazing Incidence Collector Mirror Lifetime for EUV
Lithography," Preprint ANL/MCS-P1338-0406, April 2006. |
| |
|
|
P1339.pdf |
S. Langella, S. Oster, S. Hastings,
F. Siebenlist, T. Kurc, and J. Saltz, "Dorian: Grid Service Infrastructure
for Identity Management and Federation," Preprint ANL/MCS-P1339-0406, April
2006. |
| |
|
|
P1340.pdf |
J. A. Insley, M. E. Papka, S. Dong,
G. Karniadakis, and N. T. Karonis, "Runtime Visualization of the Human
Arterial Tree," Preprint ANL/MCS-P1340-0406, April 2006. |
| |
|
|
P1341.pdf |
I. Constandache, D. Olmedilla, F.
Siebenlist, W. Nejdl, "Policy-driven Negotiation for Authorization in the
Grid," Preprint ANL/MCS-P1341-0406, April 2006. |
| |
|
|
P1342.pdf |
W. D. Gropp and A. Lumsdaine,
"Parallel Tools and Environments: A Survey," in Parallel Processing for
Scientific Computing, P. Raghavan et al., eds., SIAM Publications (to
appear). Also Preprint ANL/MCS-P1342-0406, April 2006. |
| |
|
|
P1344.pdf |
S. Dong, J. Insley, N. T. Karonis,
M. E. Papka, J. Binns, and G. Karniadakis, "Simulating and Visualizing the
Human Arterial System on the TeraGrid," Preprint ANL/MCS-P1344-0506, May
2006. |
| |
|
|
P1345.pdf |
P. Beckman, K. Iskra, K. Yoshii, S.
Coghlan, "The Influence of Operating Systems on the Performance of
Collective Operations at Extreme Scale," Preprint ANL/MCS-P1345-0506, May
2006. |
| |
|
|
P1346.pdf |
D. Buntinas, G. Mercier, and W.
Gropp, "Implementation and Shared-Memory Evaluation of MPICH2 over the
Nemesis Communication Subsystem," in Recent Advances in Parallel Virtual
Machine and Message Passing Interface, eds. B. Mohr, J. Larsson Traff,
J. Worringen, and J. Dongarra, Springer, LNCS 4192, 2006, pp. 86-95.
Also Preprint ANL/MCS-P1346-0506, May 2006. |
| |
|
|
P1347.pdf |
W. Gropp and R. Thakur, "Issues in
Developing a Thread-Safe MPI Implementation," Preprint ANL/MCS-P1347-0506,
May 2006. |
| |
|
|
P1348.pdf |
R. Latham, R. Ross, and R. Thakur,
"Can MPI Be Used for Persistent Parallel Services?," Preprint ANL/MCS-P1348-0506,
May 2006. |
| |
|
|
P1349.pdf |
W. van Drongelen, H. Koch, F. P.
Elsen, H. C. Lee, A. Mrejeru, E. Doren, C. J. Marcuccilli, M. Hereld, R. L.
Stevens, and J.-M. Ramirez, "The Role of Persistent Sodium current in
Bursting Activity of Mouse Neocortical Networks in Vitro," Preprint ANL/MCS-P1349-0506,
May 2006. |
| |
|
|
P1350.pdf |
S. Pervez, G. Gopalakrishnan, R. M.
Kirby, R. Thakur, and W. Gropp, "Formal Verification of Programs That Use
MPI One-Sided Communication," Preprint ANL/MCS-P1350-0506, May 2006. |
| |
|
|
P1351.pdf |
T. Lee and P. F. Fischer, "A
Lattice Boltzmann Equation Method without Parasitic Currents and Its
Application in Droplet Coalescence," Preprint ANL/MCS-P1351-0506, May 2006. |
| |
|
|
P1353.pdf |
M. Yan, G. Leaf, H. Kaper, V.
Novosad, P. Vavassori, R. E. Camley, and M. Grimsditch, "Dynamic Origin of
Stripe Domains in Cobalt Bars," Preprint ANL/MCS-P1353-0606, June 2006. |
| |
|
|
P1354.pdf |
J. Bresnahan, R. Kettimuthu, and I.
Foster, "XIOPerf: A Tool for Evaluating Network Protocols," Preprint
ANL/MCS-P1354-0606,
June 2006. |
| |
|
|
P1355.pdf |
Y. Zhao, M. Wilde, and I. Foster,
"Applying the Virtual Data Provenance Model," Preprint ANL/MCS-P1355-0606,
June 2006. |
| |
|
|
P1356.pdf |
M. Yan, G. Leaf, H. Kaper, V.
Novosad, P. Vavassori, R. E. Camley, and M. Grimsditch, "Formation of Stripe
Domains in Cobalt Bars via a Magnetic Soft Mode Instability," Preprint ANL/MCS-P1356.0606,
June 2006. |
| |
|
|
P1357.pdf |
J. M. Schopf, L. Pearlman, N.
Miller, C. Kesselman, I. Foster, M. D'Arcy, and A. Chervenak, "Monitoring
the Grid with the Globus Toolkit MDS4," Preprint ANL/MCS-P1357-0606, June
2006. |
| |
|
|
P1358.pdf |
S. Byna, X.-H. Sun, R. Thakur, and
W. Gropp, "Automatic Memory Optimizations for Improving MPI Dervied Datatype
Performance," Preprint ANL/MCS-P1358-0606, June 2006. |
| |
|
|
P1359.pdf |
R. E. Camley, G. Leaf, H. Kaper, M.
Yan, and M. Grimsditch, "Phase Transitions and Reversal Mechanisms in
Nanosized Magnetic Bars: The Influence of Bulk and Localized Spin Wave
Modes," Preprint ANL/MCS-P1359-0706, July 2006. |
| |
|
|
P1360.pdf |
M. Hereld, R. L. Stevens, W. van
Drongelen, and Y. C. Lee, "Framework for Interactive Million-Neuron
Simulation," Preprint ANL/MCS-P13690-0706, July 2006. |
| |
|
|
P1362.pdf |
G. von Laszewski, J. DiCarlo, B.
Allcock, "A Portal for Visualizing Grid Usage," Preprint ANL/MCS-P1362-0806,
August 2006. |
| |
|
|
P1363.pdf |
W. van Drongelen, H. C. Lee, R. L.
Stevens, and M. Hereld, "Propagation of Seizurelike Activity in a Model of
Neocortex," Preprint ANL/MCS-P1363-0706, July 2006. |
| |
|
|
P1364.pdf |
Z. Insepov, A. Hassanein, and D.
Swenson, "Computer Simulation of Surface Modification with Ion Beams,"
Preprint ANL/MCS-P1364-0706, July 2006. |
| |
|
|
P1365.pdf |
B. Norris, S. Bhowmick, D. Kaushik,
and L. C. McInnes, "Middleware for Dynamic Adaptation of Component
Applications," Preprint ANL/MCS-P1365-0806, August 2006. |
| |
|
|
P1366.pdf |
J. N. Brooks, J. P. Allain, T.
Rognlien, "Erosion/Redeposition Analysis of the ITER First Wall with
Convective and Non-convective Plasma Transport," Physics of Plasmas
13 (2006), 122502. Also Preprint ANL/MCS-P1366-0806,
August 2006. |
| |
|
|
P1367.pdf |
B. Lang, I. Foster, F. Siebenlist,
R. Ananthakrishnan, T. Freeman, "Attribute Based Access Control for Grid
Computing," Preprint ANL/MCS-P1367-0806, August 2006. |
| |
|
|
P1368.pdf |
N. Desai, R. Bradshaw, J. Hagedorn,
and C. Lueninghoener, "Directing Change Using Bcfg2," Preprint ANL/MCS-P1368-0906,
September 2006. |
| |
|
|
P1369.pdf |
J. Shin and P. D. Hovland,
"Comparison of Two Activity Analyses for Automatic Differentiation: Context-Sensitive Flow-Insensitive vs.
Context-Insensitive Flow-Sensitive," Preprint ANL/MCS-P1369-0906, September
2006. |
| |
|
|
P1371.pdf |
M. D'Souza, E. M. Glass, M. H. Syed,
Y. Zhang, A. Rodriguez, M. Y. Galperin, and N. Maltsev, "Sentra: A Database
of Signal Transduction Proteins for Comparative Genome Analysis," Preprint
ANL/MCS-P1371-0906, September 2006. |
| |
|
|
P1372.pdf |
R. Fletcher, S. Leyffer, and P.
Toint, "A Brief History of Filter Methods," Preprint ANL/MCS-P1372-0906,
September 2006. |
| |
|
|
P1373.pdf |
V. Nefedova, R. Jacob, I. Foster,
Z. Liu, Y. Liu, E. Deelman, G. Mehta, M.-H. Su, and K. Vahi, "Automating
Climate Science: Large Ensemble Simulations on the TeraGrid with the GriPhyN
Virtual Data System," Preprint ANL/MCS-P1373-0906, September 2006. |
| |
|
|
P1375.pdf |
B. Q. Deng, J. P. Allain, and L. L.
Peng, "Effects of a Liquid Lithium Curtain as the First Wall in the Fusion
Experimental Breeder (FEB-E) Reactor Plasma," Preprint ANL/MCS-P1375-0906,
September 2006. |
| |
|
|
P1376.pdf |
B. Q. Deng, J. P. Allain, Z. M. Luo,
L. L. Peng, J. C. Yan, "Near-Surface Bipartition Model for the Study of
Material Response of Plasma-Facing Surfaces Exposed to Energetic Charged
Particles," Preprint ANL/MCS-P1376-0906, September 2006. |
| |
|
|
P1377.pdf |
J. P. Allain, M. D. Coventry, and
D. N. Ruzic, "Kinematic and Theromdynamic Effects on Liquid Lithium
Sputtering," Preprint ANL/MCS-P1377-0906, September 2006. |
| |
|
|
P1378.pdf |
B. I. Gavrea, M. Anitescu, and F.
A. Potra, "Convergence of a Class of Semi-Implicit Time-Stepping Schemes for
Nonsmooth Rigid Multibody Dynamics," Preprint ANL/MCS-P1378-1006, October
2006. |
| |
|
|
P1380.pdf |
P. Balaji, D. Buntinas, S. Balay,
B. Smith, R. Thakur, and W. Gropp, "Nonuniformly Communicating Noncontiguous
Data: A Case Study with PETSc and MPI," Preprint ANL/MCS-P1380-1006, October
2006. |
| |
|
|
P1381.pdf |
D. Karpeev, I. S. Aranson, L. S.
Tsimring, and H. G. KIaper, "Interactions of Semiflexible Filaments and
Molecular Motors," Preprint ANL/MCS-P1381-1206, December 2006. |
| |
|
|
P1382.pdf |
W. Gropp and R. Thakur, "Thread
Safety in an MPI Implementation: Requirements and Analysis," Preprint ANL/MCS-P1382-1206,
December 2006. |
| |
|
|
P1383.pdf |
S. Pervez, G. Gopalakrishnan, R. M.
Kirby, R. Thakur, and W. Gropp, "A Case Study in Using Formal Methods to
Verify Programs That Use MPI One-Sided Communication," Preprint ANL/MCS-P1383-1206,
December 2006. |
| |
|
|
P1384.pdf |
D. Negrut, M. Anitescu, A. El-Azab,
and P. Zapol, "Quasicontinuum-like Reduction of DFT Calculations of
Nanostructures," Preprint ANL/MCS-P1384-1206, December 2006. |
| |
|
|
P1386.pdf |
J. Jung and A. Hassanein,
"Three-Phase CFD Analytical Modeling of Blood Flow," Preprint ANL/MCS-P1386-0107,
January 2007. |
| |
|
|
P1387.pdf |
R. Kettimuthu, W. Allcock, L.
Liming, J.-P. Navarro, and I. Foster, "GridCopy: Moving Data Fast on the
Grid," Preprint ANL/MCS-P1387-1006, October 2006. |
| |
|
|
P1388.pdf |
R. Latham, R. Ross, R. Thakur,
"Implementing MPI-IO Atomic Mode and Shared File Pointers Using MPI
One-sided Communication," Preprint ANL/MCS-P1388-0107, January 2007. |
| |
|
|
P1389.pdf |
C. Falzone, A. Chan, E. Lusk, and
W. Gropp, "A Portable Method for Finding User Errors in the Usage of MPI
Collective Operations," Preprint ANL./MCS-P1389-0107, January 2007. |
| |
|
|
P1390.pdf |
P. Beckman, K. Iskra, K. Yoshii, S. Coghlan, and A. Nataraj, "Benchmarking
the Effects of Operating System Interference on Extreme-Scale Parallel
Machines," Preprint ANL/MCS-P1390-0107, January 2007. |
| |
|
|
P1391.pdf |
N. Desai, E. Lusk, and R. Bradshaw,
"A Composition Environment for MPI Programs," Preprint ANL/MCS-P1391-0207,
February 2007. |
| |
|
|
P1392.pdf |
B. Norris, A. Hartono, and W. Gropp,
"Annotations for Productivity and Performance Portability," Preprint ANL/MCS-P1392-0107,
January 2007. |
|
|
|
P1393.pdf |
J. Bresnahan, M. Link, R.
Kettimuthu, D. Fraser, and I. Foster, "GridFTP Pipelining," Preprint ANL/MCS-P1393-0207,
February 2007. |
| |
|
|
P1395.pdf |
E. T. Ong, J. W. Larson, B. Norris,
R. L. Jacob, M. Tobis, and M. Steder, "Multilingual Interfaces for Parallel
Coupling in Multiphysics and Multiscale Systems," Preprint ANL/MCS-P1395-0207,
February 2007. |
| |
|
|
P1396.pdf |
M. R. Paul, M. I. Einarsson, P. F.
Fischer, and M. C. Cross, "Extensive Chaos in Rayleigh-Bénard
Convection," Preprint ANL/MCS-P1396-0207, February 2007. |
| |
|
|
P1397.pdf |
M. Anitescu, G. Palmiotti, W.-S.
Yang, and M. Neda, "Stochastic Finite-Element Approximation of the
Parametric Dependence of Eigenvalue Problem Solution," Preprint ANL/MCS-P1397-0307,
March 2007. |
| |
|
|
P1398.pdf |
Z. Insepov, T. Bazhirov, G. Norman,
and V. Stegailov, "Computer Simulation of Bubble Formation," Preprint ANL/MCS-P1398-0307,
March 2007. |
| |
|
| 1400-1499 |
|
| |
|
|
P1400.pdf |
J. P. Allain, M. Nieto, M.
Hendricks, A. Hassanein, C. Tarrio, S. Grantham, and V. Bakshi, "Energetic
and Thermal Sn Interactions and their Effect on EUVL Source Collector Mirror
Lifetime at High Temperatures," Preprint ANL/MCS-P1400-0307, March 2007. |
| |
|
|
P1402.pdf |
Z. Insepov, A. Hassanein, T. T.
Bazhirov, G. E. Norman, and V. V. Stegailov, "Molecular Dynamics Simulations
of Bubble Formation and Cavitation in Liquid Metals," Preprint ANL/MCS-P1402-0307,
March 2007. |
| |
|
|
P1403.pdf |
D. Sulakhe, A. Rodriguez, M. Wilde,
I. Foster, and N. Maltsev, "Interoperability of GADU in using Heterogeneous
Grid Resources for Bioinformatics Applications," IEEE Trans. on Information
Technology in Biomedicine (to appear). Also preprint ANL/MCS-P1403-0307,
March 2007. |
|
|
|
P1404.pdf |
J. N. Lyness and S. Joe,
"Determination of the Rank of an Integration Lattice," Preprint ANL/MCS-P1404-0307,
March 2007. |
| |
|
|
P1405.pdf |
P. Fischer, J. Lottes, A. Siegel,
and G. Palmiotti, "Large Eddy Simulation of Wire-Wrapped Fuel Pins I:
Hydrodynamics of a Single Pin," Preprint ANL/MCS-P1405-0307, March 2007. |
| |
|
|
P1406.pdf |
J. P. Allain, M. Nieto, M.
Hendricks, S. S. Harilal, and A. Hassanein, "Debris and Radiation-Induced
Damage Effects on EUV Nanolithography Source Collector Mirror Optics
Performance," Preprint ANL/MCS-P1406-0407, April 2007. |
| |
|
|
P1407.pdf |
B. Clifford, I. Foster, J.-S.
Voeckler, M. Wilde, and Y. Zhao, "Tracking Provenance in a Virtual Data
Grid," Concurrency and Computation: Practice and Experience (to
appear). Also Preprint ANL/MCS-P1407-0407, April 2007. |
| |
|
|
P1408.pdf |
S. S. Varghese, S. H. Frankel, and
P. F. Fischer, "Modeling Transition to Turbulence in Eccentric Stenotic
Flows," Preprint ANL/MCS-P1408-0407, April 2007. |
| |
|
|
P1409.pdf |
Z. Insepov. A. Hassanein, J. Norem,
D. R. Swenson, "Advanced Surface Polishing Using Gas Cluster Ion Beams,"
Nuclear Instruments and Methods in Physics Research, B (to appear).
Also Preprint ANL/MCS-P1409-0407, April 2007. |
| |
|
|
P1410.pdf |
F. Loth, P. FR. Fischer, and H. S.
Bassiouny, "Blood Flow in End-to-Side Anastomoses," Preprint ANL/MCS-P1410-0407,
April 2007. |
| |
|
|
P1411.pdf |
J. Shin, "Introducing Control Flow
into Vectorized Code," Preprint ANL/MCS-P1411-0407, April 2007. |
| |
|
|
P1412.pdf |
J. W. Larson and B. Norris,
"Component Specification for Parallel Coupling Infrastructure," Preprint ANL/MCS-P1412-0407,
April 2007. |
| |
|
|
P1414.pdf |
J. W. Larson, "Some Organising
Principles for Coupling in Multiphysics and Multiscale Models," Preprint ANL/MCS-P1414-0207,
February 2007. |
| |
|
|
P1415.pdf |
M. Tobis, M. Steder, J. L. Jacob,
R. T. Pierrehumbert, J. Walter Larson, and E. T. Ong, "PyMCT and PyCPL:
Refactoring the Community Climate System Model," Preprint ANL/MCS-P1415-0207,
February 2007. |
| |
|
|
P1416.pdf |
Y. Zhao, M. Hategan, B. Clifford,
I. Foster, G. von Laszewski, V. Nefedova, I. Raicu, T. Stef-Praun, and M.
Wilde, "Swift: Fast, Reliable, Loosely Coupled Parallel Computation,"
Preprint ANL/MCS-P1416-0507, May 2007. |
| |
|
|
P1417.pdf |
R. Latham, W. Gropp, R. Ross, and
R. Thakur, "Extending the MPI-2 Generalized Request Interface," Preprint ANL/MCS-P1417-0507,
May 2007. |
| |
|
|
P1418.pdf |
R. Thakur and W. Gropp, "Test Suite
for Evaluating Performance of MPI Implementations That Support
MPI_THREAD_MULTIPLE," Preprint ANL/MCS-P1418-0507, May 2007. |
| |
|
|
P1419.pdf |
W. D. Gropp and R. Thakur,
"Revealing the Performance of MPI RMA Implementations," Preprint ANL/MCS-P1419-0507,
May 2007. |
| |
|
|
P1420.pdf |
J. P. Allain, M. Nieto, M. R.
Hendricks, P. Plotkin, S. S. Harilal, A. Hassanein, "IMPACT: A Facility for
Studying the Interaction of Low-Energy Intense Charged Particle Beams with
Dynamic Heterogeneous Surfaces," Preprint ANL/MCS-P1420-0507, May 2007. |
| |
|
|
P1422.pdf |
P. Balaji, S. Bhagvar, D. K. Panda,
R. Thakur, and W. Gropp, "Advanced Flow-control Mechanisms for the Sockets
Direct Protocol over InfiniBand," Preprint ANL/MCS-P1422-0507, May 2007. |
| |
|
|
P1423.pdf |
Z. Insepov, "Surface Erosion and
Modification by Energetic Ions," Preprint ANL/MCS-P1423-0507, May 2007. |
| |
|
|
P1426.pdf |
R. Thakur and W. Gropp, "Open
Issues in MPI Implementation," Preprint ANL/MCS-P1426-0607, June 2007. |
| |
|
|
P1428.pdf |
L. C. McInnes, T. Dahlgren, J.
Nieplocha, D. Bernholdt, B. Allan, R. Armstrong, D. Chavarria, W. Elwasif,
I. Gorton, J. Kenny, M. Krishan, A. Malony, B. Norris, J. Ray, and S. Shende,
"Research Initiatives for Plug-and-Play Scientific Computing," Preprint ANL/MCS-P1428-0607,
June 2007. |
| |
|
|
P1429.pdf |
I. Konkashbaev, P. Fischer, A.
Hassanein, and N. V. Mokhov, "Enhancement of Heat Removal Using Concave
Liquid Metal Targets for High-Power Accelerators," Preprint ANL/MCS-P1429-0607,
June 2007. |
| |
|
|
P1430.pdf |
W. Elwasif, B. Norris, B. Allan,
and R. Armstrong, "Bocca: A Development Environment for HPC Components,"
Preprint ANL/MCS-P1430-0607, June 2007. |
| |
|
|
P1432.pdf |
G. Narayanaswamy, P. Balaji, and W.
Feng, "An Analysis of 10-Gigabit Ethernet Protocol Stacks in Multicore
Environments," Preprint ANL/MCS-P1432-0607, June 2007. |
| |
|
|
P1433.pdf |
S. Pervez, G. Gopalakrishnan, R. M.
Kirby, R. Thakur, and W. Gropp, "Formal Methods Applied to HPC Software
Design: A Case Study of Locking Based on MPI One-Sided Communication,"
Preprint ANL/MCS-P1433-0607, June 2007. |
| |
|
|
P1434.pdf |
K. Abhishek, S. Leyffer, and J. T.
Linderoth, "Modeling without Categorical Variables: A Mixed-Integer
Nonlinear Program for the Optimization of Thermal Insulation Systems,"
Preprint ANL/MCS-P1434-0607, June 2007. |
| |
|
|
P1435.pdf |
M. Min, P. F. Fischer, and Y.-C.
Chae, "Spectral Element Discontinuous Galerkin Simulations for Wake
Potential Calculations: NEKCEM," Preprint ANL/MCS-P1435-0607, June
2007. |
| |
|
|
P1436.pdf |
M. Min. Y.-H. Chin, P. F. Fischer,
Y.-C. Chae, and K.-J. Kim, "Fourier Spectral Simulations for Wake Fields in
Conducting Cavities," Preprint ANL/MCS-P1436-0607, June 2007. |
| |
|
|
P1437.pdf |
J. J. More', T. S. Munson, and J.
Sarich, "Optimization in SciDAC Applications," Preprint ANL/MCS-P1437-0707,
July 2007. |
| |
|
|
P1438.pdf |
T. Peterka, R. L. Kooima, D. J.
Sandin, A. Johnson, J. Leigh, and T. A. DeFanti, "Advances in the Dynallax
Solid-State Dynamic Parallax Barrier Autostereoscopic Visualization Display
System," Preprint ANL/MCS-P1438-0707, July 2007. |
| |
|
|
P1439.pdf |
J. L. Träff,
W. Gropp, and R. Thakur, "Self-Consistent MPI Performance Requirements,"
Preprint ANL/MCS-P1439-0707, July 2007. |
| |
|
|
P1440.pdf |
S. Pervez, G. Gopalakrishnan, R. M.
Kirby, Robert Palmer, Rajeev Thakur, and William Gropp, "Practical
Model-Checking Method for Verifying Correctness of MPI Programs," Preprint
ANL/MCS-P1440-0707, July 2007. |
| |
|
|
P1442.pdf |
J. Bresnahan, R. Kettimuthu, M.
Link, I. Foster, "Harnessing Multicore Processors for High-Speed Secure
Transfer," Preprint ANL/MCS-P1442-0707, July 2007. |
| |
|
|
P1443.pdf |
K. Keahey, T. Freeman, J. Lauret,
and D. Olson, "Virtual Workspaces for Scientific Applications," Preprint ANL/MCS-P1443-0707,
July 2007. |
| |
|
|
P1444.pdf |
L. Yang, C. Liu, J. M. Schopf, and
I. Foster, "Anomaly Detection and Diagnosis in Grid Environments," Preprint
ANL/MCS-P1444-0707, July 2007. |
| |
|
|
P1445.pdf |
A. Baranovski, S. Bharathi, J.
Bresnahan, A. Chervenak, I. Foster, D. Fraser, T. Freeman, D. Gunter, K.
Jackson, K. Keahey, C. Kesselman, D. E. Konerding, N. Leroy, M. Link, M.
Livny, N. Miller, R. Miller, G. Oleynik, L. Pearlman, J. M. Schopf, R.
Schuler, and B. Tierney, "Enabling Distributed Petascale Science," Preprint
ANL/MCS-P1445-0707, July 2007. |
| |
|
|
P1447.pdf |
N. Desai, E. Lusk, A. Cherry, and
T. Voran, "The Computer as Software Component: A Mechanism for
Developing and Testing Resource Management Software," Preprint ANL/MCS-P1447-0707,
July 2007. |
| |
|
|
P1448.pdf |
P. Balaji, W. Feng, S. Bhagvat, D.
K. Panda, R. Thakur, and W. Gropp, "Analyzing the Impact of Supporting
Out-of-Order Communication on In-order Performance with iWARP," Preprint ANL/MCS-P1448-0707,
July 2007. |
| |
|
|
P1449.pdf |
D. R. Dechow, B. Norris, and J.
Amundson, "The Common Component Architecture for Particle Accelerator
Simulations," Preprint ANL/MCS-P1459-0807, August 2007. |
| |
|
|
P1450.pdf |
J. N. Lyness, "Numerical Evaluation
of a Fixed-Amplitude Variable-Phase Integral," Preprint ANL/MCS-P1450-0807,
June 2007. |
| |
|
|
P1451.pdf |
S. Park, "Weights and Acceptance
Ratios in Generalized Ensemble Simulations," Preprint ANL/MCS-P1451-0807,
August 2007. |
| |
|
|
P1452.pdf |
P. Balaji, W. Feng, J. Archuleta,
H. Lin, R. Kettimuthu, R. Thakur, and X. Ma, "ParaMEDIC: Parallel Metadata
Environment for Distributed I/O and Computing," Preprint ANL/MCS-P1452-0807,
August 2007. |
| |
|
|
P1453.pdf |
K. Iskra, J. W. Romein, K. Yoshii,
and P. Beckman, "ZOID: I/O-Forwarding Infrastructure for Petascale
Architectures," Preprint ANL/MCS-P1453-0807, August 2007. |
| |
|
|
P1454.pdf |
A. A. Rodriguez, T. Bompada, M.
Syed, P. K. Shah, and N. Maltsev, "Evolutionary Analysis of Enzymes Using
Chisel," Preprint ANL/MCS-P1454-0807, August 2007. |
| |
|
|
P1458.pdf |
J. Bresnahan, M. Link, G. Khanna,
Z. Imani, R. Kattimuthu, and I. Foster, "Globus GridFTP: What's New in
2007," Preprint ANL/MCS-P1458-0907, September 2007. |
| |
|
|
P1459.pdf |
C. Zhang, M. G. Knepley, D. A.
Yuen, and Y. Shi, "Two New Approaches in Solving the Nonlinear Shallow Water
Equations for Tsunamis," Preprint ANL/MCS-P1459-0907, September 2007. |
| |
|
|
P1460.pdf |
J. N. Brooks and J. P. Allain,
"Particle Deposition and Optical Response of ITER Motional Stark Effect
Diagnostic First Mirrors," Preprint ANL/MCS-P1460-1007, October 2007. |
