@techreport{KapTip99:abs,
author="Hans G. Kaper and S Tipei",
title="An Abstract Approach to Music",
number=ANL/MCS-P748-0399",
month = "March",
year="1999"}
@techreport{KapTipWie99:datasonify,
title="Data Sonification and Sound Visualization",
author="H. G. Kaper and S. Tipei and E. Wiebel",
journal="Computing in Science and Engineering",
year="1999",
pages="48-58",
number="4",
volume="1"}
@techreport{ThaGroLus98:sieve,
author="R. Thakur and W. Gropp and E. Lusk",
title="Data Sieving and Collective I/O in ROMIO",
number="ANL/MCS-P723-0898",
year="1998",
note="P723.ps.Z",}
@article{CzyWisWri98:neosguide,
author="J. Czyzyk and T. Wisniewski and S. J. Wright",
title="Optimization Case Studies in the NEOS Guide",
journal="SIAM Review",
volume=" 41",
number="1",
year=" 1999,"
pages="148-163"}
@article{GunKapLea99:implicitint,
author="D. O. Gunter and H. G. Kaper and G. K. Leaf",
journal="SIAM J. Sxi. Comput.",
volume ="23",
issue="6",
pages ="1944-1959",
title="Implicit Integration of the Time-Dep endent Ginzburg-Landau Equations of Superconductivity",
year="2002"}
@article{CzyMesMor,
title="The NEOS Server",
author="Joseph Czyzyk and Michael P. Mesnier and Jorge J. More'",
journal="IEEE Computational Science and Engineering",
volume = "5",
year="1998",
pages ="68-75"}
@techreport{FreJoPla:smooth97,
author="L. Freitag and M. Jones and P. Plassmann",
title="A Parallel Algorithm for Mesh Smoothing",
institution="Argonne National Laboratory",
number="ANL/MCS-P668-0697",
month="July",
year="1997",
@inbook{GroMor:award2,
title=" Optimization environments and the NEOS Server",
author="William Gropp and Jorge J. More'",
booktitle ="Approximation Theory and Optimization",
editor= M. D. Buhmann and A. Iserles",
publisher = "Cambridge University Press",
year="1997",
pages = "167-182"}
@article{JarWri94,
author="F. Jarre and S. Wright",
title="The Role of Linear Objective Functions in Barrier Methods",
journal = "Mathematical Programming",
volume = "A84",
year= "1999",
pages = "357-373"}
@article{LinMor98:siamopt,
author="C.-J. Lin and J. J. More'",
title="Newton's Method for Large
Bound-Constrained Optimization Problems",
journal="SIAM Journal on Optimization",
year="1999",
volume = "9",
issue = "4",
pages = "1100-1127"}
@inproceedings{Wri:modified96,
author="S. Wright",
title="Modified Cholesky Factorizations in Interior-Point Algorithms for Linear Programming",
note="ANL/MCS-P600-0596",
year="1999",
booktitle = "Foundations of Computer-Aided Process Design:
AIChE Symposium Series",
publisher = "CACHE Publications"}
@article{CzyWisWri98:neosguide,
author="J. Czyzyk and T. Wisniewski and S. J. Wright",
title="Optimization Case Studies in the NEOS Guide",
journal="SIAM Review",
volume=" 41",
number="1",
year=" 1999,"
pages="148-163"}
@inproceedings{AndGroKauKeySmi99:cfd,
title="Achieving High Sustained Performance in an Unstructured Mesh CFD Application",
author = "W. K. Anderson and W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
note = "ANL/MCS-P776-0899",
booktitle = "Proceedings of SC '99",
year = "1999"}
@article{LevGroppForsKett:3d1996,
author="David Levine and William Gropp and Kimmo Forsman and Lauri Kettunen",
title="Parallel Computation of Three-Dimensional Nonlinear Magnetostatic Problems",
note="MCS-P558-0196",
journal= "Concurrency Practice and Experience",
volume = "11",
issue = "2",
pages = "109-120",
year="1999"}
@techreport{GroLus99:reproducible,
author="W. Gropp and E. Lusk",
title="Reproducible Measurements
of MPI Performance Characteristics",
number="ANL/MCS-P755-0699",
year="1999",
note="P755.ps.Z",}
@inproceedings{KarSupFosGroLusBre00:collective,
author = N. Karonis and B de Supinski and I. Foster and W. Gropp and E. Lusk and J. Bresnahan",
title = "Exploiting Hierarchy in Parallel Computer Networks to Optimize Collective Operation Performance",
book = "Proceedings of the International Parallel and Distributed Processing
Symposium (IPDPS2000)",
year = "2000 (to appear)"}
@techreport{CarLigRosTha00:pvfs,
author = "P. H. Carns and W. B. Ligon III and R. B. Ross and R. Thakur",
title = "PVFS: A Parallel File System for Linux Clusters",
number = "ANL/MCS-P804-0400",
note = "ANL/MCS-P804-0400",
month = "April",
year = "2000"}
@article{GroKeyMcITid00:cfd,
author = "W. D. Gropp and D. E. Keyes and L. C. McInnes and M. D. Tidriri",
title = "Globalized Newton-Krylov-Schwarz Algorithms and Software for Parallel Implicit CFD",
note = "also ANL/MCS-P788-0100",
journal = "Int. J. High Perform. Comput. Appl.",
year = "2000"}
@techreport{FreLoy00:remote,
author = "L. Freitag and R. M. Loy",
title = "Comparison of Remote Visualization Strategies for Interactive Exploration of Large Data Sets",
number = "ANL/MCS-P803-0300",
note = "ANL/MCS-P803-0300",
month = "March",
year= "2000"}
@techreport{FreLoy00:desktop,
author = "L. A. Freitag and R. M. Loy",
title = "Using Desktop Graphics Workstations for Interactive Remote Exploration of Large Data Sets",
note = "Preprint ANL/MCS-P809-0400",
number = "ANL/MCS-P809-0400",
month= "April",
year = "2000"}
@article{ZakLusGroSwi99:jumpshot,
author="O. Zaki and E. Lusk and W. Gropp and D. Swider",
title="Toward Scalable Performance Visualization with Jumpshot",
journal="Int'l J. of High Performance Computing Applications",
year="1999",
note="ANL/MCS-P763-0699,
P763.ps.Z",}
@inproceedings{GroKauKeySmi99:realistic-cfd,
author = "W. Gropp and D. Kaushik and D. Keyes and B. Smith",
title = "Toward Realistic Performance Bounds for Implicit CFD Codes",
booktitle="Proceedings of Parallel CFD '99",
year = "1999",
publisher = "Elsevier"}
@techreport{dePRad00:tumor,
title = "A Mathematical Tumor Model with Immune Resistance and Drug Therapy: An Optimal Control Approach",
author = "L. G. de Pillis and A. Radunskaya",
number = "ANL/MCS-P805-0400",
month = "April",
year = "2000"}
@techreport{dePdeP00:budget,
author ="L. G. de Pillis and E. G. de Pillis",
title = "A Mathematical Framework for Understanding Continuum Effects of Budget Fluctuations on a University",
number = "ANL/MCS-P806-0400",
note = "Preprint < ahref="ftp://info.mcs.anl.gov/pub/tech_reports/reports/P806.p
s.Z">ANL/MCS-P806-0400",
month ="April",
year = "2000"}
@techreport{dePdeP00:impact,
title = "The Long-Term Impact of University Budget Cuts: A Mathematical Model",
author = "E. G. de Pillis and L. G. de Pillis",
number = "ANL/MCS-P8o17-0500",
month = "May",
year = "2000"}
@techreport{FreLoy00:remote,
author = "L. Freitag and R. M. Loy",
title = "Comparison of Remote Visualization Strategies for Interactive Exploration of Large Data Sets",
number = "ANL/MCS-P803-0300",
note = "ANL/MCS-P803-0300",
month = "March",
year= "2000"}
@techreport{YilWri00:warm,
author = "E. A. Yildirim and S. J. Wright",
title="Warm-start Strategies in Interior-Point Methods for Linear Programming",
number = "ANL/MCS-P799-0300",
note = "ANL/MCS-P799-0300",
month = "March",
year= "2000"}
@techreport{Wri99:intpt,
author = "S. J. Wright",
title = "Recent Developments in Interior-Point Methods",
number = "ANL/MCS-P783-0999",
month = "September",
year = "1991"}
@techreport{ArmGanGeiKeaKohMciParSmo99:cca,
author="R. Armstrong and D. Gannon and A. Geist and K. Keahey and S. Kohn and L. McInnes and S. Parker and B. Smolinski",
title="Toward a Common Component Architecture for High-Performance Scientific Computing",
number="ANL/MCS-P759-0699",
year="1999",
note="P759.ps.Z",}
@techreport{TufFis99"terascale,
author="H. M. Tufo and P. F. Fischer",
title="Terascale Spectral Element Algoritihms and Implementations",
number="ANL/MCS-P762-0699",
year="1999",
note="P762.ps.Z",}
@techreport{RenSheWri99:laue,
author="Z. Ren and R. Sheng and S. J. Wright",
title="Advanced Computational Techniques for L"aue Diffraction",
number="ANL/MCS-P740-0199",
year="1999",
note="P740.ps.Z",}
@techreport{TufFisPapSzy99:hairpin,
author="H. M. Tufo and P. F. Fischer and M. E. Papka and M. Szymanski",
title = "Hairpin Vortex Formation, a Case Study
for Unsteady Visualization",
number=" ANL/MCS-P774-0799",
year="1999",
note = "P774.ps.Z",}
@inproceedings{AndGroKauKeySmi99:cfd,
title="Achieving High Sustained Performance in an Unstructured Mesh CFD Application",
author = "W. K. Anderson and W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
booktitle = "Proceedings of SC '99",
note = "ANL/MCS-P776-0899",
year = "1999"}
@article{FisMul99:filter,
author="P. F. Fischer and J. S. Mullen",
title="Filter-based Stabilization of Spectral Element Methods",
journal ="C. R. Acad. Sci. Paris",
volume = "332, Series 1",
pages = "265-270",
year = "2001"}
@techreport{FisTuf99:spectral,
title = "High-Performance Spectral Element Algorithms and Implementations",
number = "ANL/MCS-P778-0899",
author = "P. F. Fischer and H. M. Tufo",
month = "August",
year = "1999"}
@techreport{FreUrn99:furnace,
author="L. Freitag and T. Urness",
title="Analyzing Industrial
Furnace Efficiency Using Comparative Visualization in a Virtual Reality Environment",
number="ANL/MCS-P744-0299",
year="1999",
note="P744.ps.Z",}
@techreport{FrePla99:local,
author="L. A. Freitag and P. Plassmann",
title="Local
Optimization-Based Simplicial Mesh Untangling and Improvement",
number="ANL/MCS-P749-0399",
year=" 1999",
note="P749.ps.Z",}
@inproceedings{FreGroHovMcISmi99:interface,
author="L. A. Freitag and W. D. Gropp and P. D. Hovland and L. C.
McInnes and B. F. Smith",
title="Infrastructure and Interfaces for Large-Scale Numerical Software",
booktitle="1999 International Confernece on Parallel and Distriubted Processing Techniques and Applications",
year="1999",
address="Las Vegas",
note="ANL/MCS-P751-0599,
P751.ps.Z",}
@inproceedings{FreLoy99:adapt,
author="L. A. Freitag and R. M. Loy",
title="Adaptive, Multiresolution Visualization of Large Data Sets Using Parallel Octrees",
booktitle="Fifth U.S. Congress on Computational Mechanics",
address="Boulder",
year="1999",
note="ANL/MCS-P752-0599,
P752.ps.Z",}
@techreport{FreKnu99:shape,
author="L. A. Freitag and P. M. Knupp",
title="Tetrahedral Element Shape Optimization via the Jacobian Determinant and Condition Number",
number="ANL/MCS-P769-0799,
year="1999",
note="P769.ps.Z",}
@techreport{FlaLoySheTer99:discontinue,
author="J. E. Flaherty and R. M. Loy and M. S. Shephard and J. D. Teresco",
title="Software for the Parallel Adaptive Solution of Conservation Laws by Discontinuous Galerkin Methods",
number="ANL/MCS-P773-0799",
year="1999",
note="P773.ps.Z",}
@techreport{Ani99:sequent,
author="M. Anitescu",
title="On the Rate of Convergence of Sequential Quadratic Programming with Nondifferentiable Exact Penalty Function in the Presence of Constaint Degeneracy",
number="ANL/MCS-P760-0699",
year="1999",
note=" P760.ps.Z",}
@techreport{Ani99:degenerate,
author="M. Anitescu",
title="Degenerate Nonlinear Programming with a Quadratic Growth Condition",
number="ANL/MCS-P761-0699",
year="1999",
note="P761.ps.Z",}
@techreport{FrePla99:local,
author="L. A. Freitag and P. Plassmann",
title="Local Optimization-Based Simplicial Mesh Untangling and Improvement",
number="ANL/MCS-P749-0399",
year=" 1999",
note="P749.ps.Z",}
@techreport{WriOrb99:log,
author= "S. J. Wright and D. Orban",
title = "Properties of the Log-Barrier on Degenerate Nonlinear Programs",
number = "ANL/MCS-P772-0799",
month="July",
year = "1999",
institution = "Argonne National Laboratory"}
@techreport{MicMouAniRam99:stubband,
author="M. K. Mihcak, and P. Moulin and M. Anitescu and K. Ramchandran",
title="Rate-Distortion-Optimal Subband Coding without Perfect-Reconstruction Constraints",
number="ANL/MCS-P766-0699",
year="1999",
note="P766.ps.Z",}
@techreport{ThaGroLus99:mpiio,
author="R. Thakur and W. Gropp and E. Lusk",
title="Achieving High Performance with MPI-IO",
number="ANL/MCS-P742-0299",
year="1999",
note="P742.pdf",}
@techreport{CowGro98:queue,
author="J. Cownie and W. Gropp",
title="A Standard Interface for Debugger Access to Message Queue Information in MPI",
number="ANL/MCS-P754-0699",
year="1999",
note="P754.ps.Z",}
@techreport{Fre99:optms,
author="Lori Freitag",
title="Users Manual for Opt-MS: Local Methods for Simplicial Mesh Smoothing and Untangling",
number="ANL/MCS-TM-239",
month="April",
year =1999,}
@inproceedings{Gro00:signatures,
author="W. D. Gropp",
title = "Runtime Checking of Datatype Signatures in MPI",
book="Recent Advances in PVM and MPI",
editor="J. Dongarra and P. Kacsuk and N. Podhorszki",
publisher = "Proc. 7th European PVM/MPI User's Group Meeting",
year="to appear"}
@techreport{BenYe00:stableset,
author = "S. J. Benson and Y. Ye",
title="Approximating Maximum Stable Set and Minimum Graph Coloring Problems with the Positive Semidefinite Relaxation",
number="ANL/MCS=P830-0600",
institution="Argonne National Laboratory",
year = "2000"}
@techreport{BisBucHov00:toolkits,
author="C. H. Bischof and H. M. Bucker and P. D. Hovland",
title = "On Combining Computational Differentiation and Toolkits for Parallel Scientific Computing",
number = "ANL/MCS-P797-0200",
year = "2000",
institution = "Argonne National Laboratory"}
@article{HovMcI00:compressible,
title="Parallel Simulation of Compressible Flow Using Automatic Differentiation and PETSc",
author="P. D. Hovland and L. C. McInnes",
journal = "Parallel Computing (special issue on Parallel Computing in Aerospace",
year = "2000"}
@techreport{BisBuc00:derivatives,
author="C. H. Bischof and H. M. Bucker",
title = "Computing Derivatives of Computer Programs",
number = "ANL/MCS-P813-0400",
year = "2000",
institution = "Argonne National Laboratory"}
@article{Choetal00:cluster,
author="A. Choudhary and M. Kandemir and J. No and G. Memik and X. Shen and W. Liao
and H. Nagesh and S. More and V. Taylor and R. Thakur and R. Stevens",
title="Data Management for Large-Scale Scientific Computations in High Performance Distributed Systems"
journal = "Cluster Computing",
year = "to appear"}
@inproceedings{DicTha99:threads,
author = "P. Dickens and R. Thakur",
title = "Improving Collective I/O Performance Using Threads",
booktitle="Proceedings of the 13th International Parallel Processing Symposium and 10th Symposium on Parallel and Distributed Processing",
year="1999",
pages ="38-45"}
@techreport{NoThaCho00:integrating,
author = "J. No and R. Thakur and A. Choudhary",
title = "Integrating Parallel File I/O and Database Support for High-Performance Scientific Data Management",
number = "ANL/MCS-P798-0300",
institution="Argonne National Laboratory",
year = "2000"}
@inproceedings{ThaGroLus99:mpi-portable,
author = "R. Thakur and W. Gropp and E. Lusk",
title = "On Implementing MPI-IO Portably and with High Performance",
booktitle="Proceedings of the 6th Workshop on I/O in Parallel and Distributed Systems",
year = "1999",
pages = "23-32"}
@techreport{DicTha00:evaluation,
author="P. Dickens and R. Thakur",
title = "An Evaluation of Java's I/O Capabilities for High-Performance Computing",
number="Preprint",
year="2000"}
@techreport{DicTha00:collective-io,
author="P. Dickens and R. Thakur",
title = "On Implementing High-Performance Collective I/O",
number="Preprint",
year="2000"}
@techreport{TufFisPapBlo99:blomvortex,
author = "H. M. Tufo and P. F. Fischer and M. E. Papka and K. Blom",
title = "Numerical Simulation and Immersive Visualization of Hairpin Vortices",
number ="ANL/MCS-P779-0899",
year ="1999",
institution = "Argonne National Laboratory"}
@book{book-opt,
author="J. Nocedal and S. J. Wright",
title = "Numerical Optimization",
publisher = "Springer",
year = "1999"}
@book{book-primal,
author="Stephen J. Wright",
title="Primal-Dual Interior-Point Methods",
publisher="SIAM",
year = "1996"}
@inproceedings{AllBadQinRawWri99:horizon,
title="Nonlinear Predictive Control and Moving Horizon Estimation--An Introductory Overview",
author = "F. Allgoewer and T. A. Badgwell and J. S. Qin and J. B. Rawlings and S. J. Wright",
booktitle="Advances in Control",
publisher = "Springer",
editor = "P. M. Frank",
year = "1999"}
@article{MorLin99:limited,
author="J. J. More' and C.-J. Lin,
title = "Incomplete Cholesky Factorizations with Limited Memory",
journal = "SIAM Journal on Scientific Computing",
volume = "21",
year = "1999",
pages = "24-45"}
@article{SieWri99:radiative,
author = "C. E. Siewert and S. J. Wright",
title = "Efficient Eigenvalue Calculations
in Radiative Transfer",
journal ="J. Quantitative Spectroscopy and Radiative Transfer",
volume = "62",
year="1999",
pages = "685-688"}
@inproceedings"Wri99:aiche,
author="S. J. Wright",
title ="Algorithms and Software for Linear and Nonlinear
Programming",
booktitle="Foundations of Computer-Aided Process Design,
AIChE Symposium Series",
publisher="CACHE Publications",
year = "1999"}
@article{PotWri00:potra,
title = "Interior-Point Methods",
author="F. A. Potra and S. J. Wright",
journal = "Journal of Computational and Applied Mathematics",
year = "2000",
volume="124",
pages="281-302"}
@techreport{Wri00:lcp,
author = "S. J. Wright",
title = "On Reduced Convex QP Formulations of Monotone LCP Problems",
number = "ANL/MCS-P808-0400",
year = "2000",
institution = "Argonne National Laboratory"}
@inproceedings{Wri99:oxford,
author = "S. J. Wright",
title = "Optimzation Software Packages",
booktitle = "Handbook of Applied Optimization",
editor = "M. Resende and P. Pardalos",
publisher = "Oxford University Press",
year = "to appear"}
@techreport{BonBorMor98:copstm,
author = "A. S. Bondarenko and D. M. Bortz and J. J. More'",
title = "COPS: Large-Scale Nonlinearly Constrained Optimization Problems",
number = "ANL/MCS-TM-237",
institution = "Mathematics and Computer Science Division, Argonne National Laboratory",
year = "1998, revised 1999"}
@book{SmiBjoGro96,
author = "B. Smith and P. Bjorstad and W. Gropp",
title = "Domain Decomposition",
publisher="Cambridge University Press",
year = "1996"}
@inproceedings{BalGroMciSmi:crpc-soft,
author = "S. Balay and W. Gropp and L. McInnes and B. Smith",
title = "Software for the Scalable Solution of PDEs",
booktitle = "The CRPC Handbook of Parallel Computing",
publisher= "Morgan-Kaufmann",
year = "to appear"}
@book{using-2nd,
author="William Gropp and Ewing Lusk and Anthony Skjellum",
title="Using MPI",
edition="second",
publisher = "MIT Press",
year = "1999"}
@book{using-2",
title = "Using MPI-2",
author="William Gropp and Ewing Lusk and Rajeev Thakur",
publisher = "MIT Press",
year = "1999"}
@book{completeref,
title ="MPI: The Complete Reference - 2nd Edition, Volume 2",
publisher="MIT Press",
year = "1998",
author = "William Gropp and Steven Huss-Lederman and Andrew Lumsdaine and Ewing Lusk and
Bill Nitzberg and William Saphir and Marc Snir"}
@book{using-1,
title ="Using MPI: Portable Parallel Programming with the Message Passing Interface",
author ="William Gropp and Ewing Lusk and Anthony Skjellum",
publisher="MIT Press",
year="1994"}
@inproceedings{GroLusSwi99:derived,
author="W. Gropp and E. Lusk and D. Swider",
title = "Improving the Performance of MPI Derived Datatypes",
booktitle=" Proceedings of the 3rd Annual MPI Developers and Users
Conference",
editor="A. Skjellum and P. V. Bangalore and Y. S. Dandass",
address="Starkville, Mississippi",
year="1999",
pages="25-30"}
@article{CraGunKapKosLeaVin00:driven,
author="G. W. Crabtree and D. O. Gunter and H. G. Kaper and A. E. Koshelev and G. K. Leaf and V. M. Vinokur",
title="Numerical Simulations of Driven Vortex Systems",
journal = "Physical Review B",
volume= "61",
number = "2",
month = "January",
year="2000"}
@article{KapNor00:frozen,
author="H. G. Kaper and H. Nordborg",
title="The Frozen-Field Approximation and the Ginzburg-Landau Equations of Superconductivity",
journal="J. Engineering Mathematics",
year = "2001",
volume="39",
pages="221-240"}}
@article{GarKap98:superburg,
author="M. Garbey and H. G. Kaper",
title="Asymptotic-Numerical Study of Supersensitivity for Generalized Burgers Equations",
journal="SIAM J. Sci. Comput.",
volume="22",
number = "1",
yeear="2000",
pages="368-385"}
@techreport{Dol01:neos-ad,
author="E. D. Dolan",
title="NEOS Server 4.0 Administrative Guide",
number = "Tech. Memo ANL/MCS-TM-250",
year="2001"}
@techreport{DolHovMorNorSMi01:remote,
title="Remote Access to Mathematical Software",
author="E. Dolan and P. Hovland and J. More' and B. Norris and B. Smith",
number="ANL/MCS-P889-0601",
month = "June",
year="2001"}
@techreport{RoyFosGroKarSanToo00:mpichgq,
author="A. Roy and I. Foster and W. Gropp and N. Karonis and V. Sander and B. Toonen",
title="MPICH-GQ: Quality-of-Service for Message Passing Programs",
number="ANL/MCS-P838-0700",
month="July",
year="2000"}
@inproceedings{MahHofHarKar99:multivariate,
author="G. Mahinthakurmar and Forrest M. Hoffman and William W. Hargrove and Nicholas T. Karonis",
title=""Multivariate Geographic Clustering in a Metacomputing Environment Using Globus",
booktitle="Proc. Supercomputing 99",
address="Portland, Oregon",
month="November",
year = "2000"}
@inproceedings{SupKar99:broadcasts,
author="Bronis R. de Supinski and Nicholas T. Karonis",
title="Accurately Measuring MPI Broadcasts in a Computational Grid",
booktitle="Proc. 8th IEEE Symp. on High Performance Distributed Computing",
address="Redondo Beach, CA",
month="August",
year="1999"}
@inproceedings{FosKar98:gridmpi,
author="Ian Foster and Nicholas T. Karonis",
title="A Grid-enabled MPI: Message Passing in Heterogeneous Distributed Computing Systems",
booktitle="Proc. Supercomputing 98",
month="November",
year="1998"}
@article{FosGeiGroKarLusThiTue98:mpi-wide,
author="Ian Foster and Jonathan Geisler and William Gropp and Nicholas Karonis and Ewing Lusk and George Thiruvathukal and Steven Tuecke",
title="Wide-Area Implementation of the Message Passing Interface",
journal="Parallel Computing",
volume ="24",
number ="12",
pages ="1735-1749",
year=" 1998"}
@techreport{ButBroLus00:procman,
author="R. Butler and W. Gropp and E. Lusk",
title="A Scalable Process-Management Environment for Parallel Programs",
number="ANL/MCS-P812-0400",
month="April",
year="2000"}
@techreport{ThaGro00:parallelio,
title="Parallel I/O",
author="R. Thakur and W. Gropp",
number="ANL/MCS-P837-0700",
month="July",
year="2000"}
@techreport{DikTha00:collectio,
title="On Implementing High-Performance Collective I/O",
author= "P. M. Dickens and R. Thakur",
number = "ANL/MCS-P852-1100",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{HovMcI:adpetsc,
title="Parallel Simulation of Compressible Flow Using Automatic Differentiation and PETSc",
author= "P. D. Hovland and L. C. McInnes",
number = "ANL/MCS-P796-0200",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{Tay20:globalenv,
title="Global Environmental Management: A Historical Perspective",
author="J. Taylor",
number="ANL/CGC-004-0900",
month="September",
year="2000",
institution="Argonne National Laboratory"}
@techreport{CalCurDurFryHenMacOlsRicRosTimTufTruZin00:reactive,
title="High-Performance Reactive Fluid Flow Simulation s Using Adaptive Mesh Refinement on Thousands of Processors",
author = A. C. Calder and B. C. Curtis and L. J. Dursi and B. Fryxell and G. Henry and P. MacNeice and K. Olson and P. Ricker and R. Rosner and F. X. Timmes and H. M. Tufo and J. W. Truran and M. Zingale",
number = "ANL/MCS-P846-0900",
month="September",
year="2000",
institution="Argonne National Laboratory"}
@techreport{Ili00:genuine,
title="Genuinely Nonlinear Models for Convection-dominated Problems",
author="T. Iliescu",
number="ANL/MCS-P857-1100",
month="November",
year="2000",
institution="Argonne National Laboratory}
@techreport{SeeHov00:pvode-ad,
title="Sensitivity Analysis Using Parallel ODE Solvers and Automatic Differentiation in C: SensPVODE and ADIC",
author="S. L. Lee and P. D. Hovland",
number="ANL/MCS-P818-0500",
month="May",
year="2000",
institution="Argonne National Laboratory"}
@techreport{KimHov00:seaice,
author="J. G. Kim and P. D. Hovland",
title="Sensitivity Analysis and Parameter Tuning of a Sea-Ice Model",
number="ANL/MCS-P819-0500",
month="May",
year="2000",
institution="Argonne National Laboratory"}
@inproceedings{GroKauKeySmi00:meshcfd,
author="W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
title="Performance Modeling and Tuning of an Unstructured Mesh CFD Application",
booktitle="Proceedings of SC2000"}
year="to appear"}
@techreport{BonDicTha00:fileio,
author="D. Bonachea and P. Dickens and R. Thakur",
title="High-Performance File I/O in Java: Existing Approaches and Bulk I/O Extensions",
year="2000",
month="August",
number="ANL/MCS-P840-0800",
institution="Argonne National Laboratory"}
@techreport{DicTha00:collectio,
author="P. Dickens and R. Thakur",
title="On Implementing High-Performance Collective I/O",
institution="Argonne National Laboratory",
number="ANL/MCS-P849-1000",
month="September",
year="2000"}
@techreport{BucBusHov00:matmat,
author="H. M. Bucker and K. R. Buschelman and P. D. Hovland",
title="A Matrix-Matrix Multiplicatoin Approach to the Automatic Differentiation and Parallelization of Straight-Line Codes",
number="ANL/MCS-P854-1000",
institution="Argonne National Laboratory",
month="October",
year="2000"}
@techreport{GroKauKeySmi00:latband,
author="W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
title="Latency, Bandwidth, and Concurrent Issue Limitations in High-Performance CFD",
number="ANL/MCS-P850-1000",
institution="Argonne National Laboratory",
month="October",
year="2000"}
@techreport{BusGroMcISmi00:lessonslearned,
author="K. R. Buschelman and W. D. Gropp and L. C. McInnes and B. F. Smith",
title =""PETSc and Overture: Lessons Learned Developing an Interface between Components",
number="ANL/MCS-P858-1100",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{NorHo00v:appserver",
author="B. Norris and P. D. Hovland",
title ="An Application Server for Automatic Differentiation",
number="ANL/MCS-P856-1100",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{HovKeyMcISam00:pde-const.
author="P. D. Hovland and D. E. Keyes and L. C. McInnes and W. Samyono",
title="Using Automatic Differentiation for Second-Order Matrix-Free Methods in PDE-constrained Optimization",
year = "2000",
month="November",
institution="Argonne National Laboratory"}
@techreport{Mo00r:adinopt,
author="J. J. More'",
title="Automatic Differentiation Tools in Optimization Software",
year = "2000",
number="ANL/MCS-P859-1100:,
month="November",
institution="Argonne National Laboratory"}
@techreport{GroKauKeySmi00:implicitcfd,
author="W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
title="High-Performance Parallel Implicit CFD",
number="ANL/MCS-P863-1200",
month="December",
year="2000",
institution="Argonne National Laboratory"}
@techreport{Wri00:algstable,
author="S. J. Wright",
title="Constraint Identification and Algorithm Stabilization for Degenerate Nonlinear Programs",
number="ANL/MCS-P865-1200",
month="December",
year="2000",
institution="Argonne National Laboratory"}
@techreport{BenMcIMor00:gpcg,
author="S. J. Benson and L. C. McInnes and J. J. More'",
title="GPCG: A Case Study in the Performance and Scalability of Optimization Algorithms",
number="ANL/MCS-P768-0799",
month = "September",
year="2000",
institution="Argonne National Laboratory"}
@techreport{DolMor00:cops2,
title="Benchmarking Optimization Software with COPS",
author="E. D. Dolan and J. J. More'",
number="ANL/MCS-TM-246",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{FerMun00:semismooth,
title="Semismooth Support Vector Machines",
author="M. C. Ferris and T. S. Munson",
number="ANL/MCS-P860-1100",
month="November",
year="2000",
institution="Argonne National Laboratory"}
@techreport{NoThaKauFreCho00irregularapps,
title="A Scientific Data Management System for Irregular Applications",
author="J. No and R. Thakur and D. Kaushik and L. Freitag and A. Choudhary",
number="ANL/MCS-P866-1000",
month="October",
year="2000",
institution="Argonne National Laboratory"}
@techreport{GroKauKeySmi00:meshcfd,
title="Understanding the Parallel Scalability of an Implicit Unstructured Mesh CFD Code",
author="W. D. Gropp and D. K. Kaushik and D. E. Keyes and B. F. Smith",
number="ANL/MCS-P845-0900",
month="September",
year="2000",
institution="Argonne National Laboratory"}
@techreport{Ani00:unlagrange,
title="Nonlinear Programs with Unbounded Lagrange Multiplier Sets",
author="M. Anitescu",
number="ANL/MCS-P793-0200",
month="October",
year="2000",
institution="Argonne National Laboratory"}
@techreport{DolMor01:perfprofile,
title="Benchmarking Optimization Software with Performance Profiles",
author="E. D. Dolan and J. J. More'",
number="ANL/MCS-P861-1200",
month="January",
year="2001",
institution="Argonne National Laboratory"}
@article{JiaKapLea01:hysteresis,
title="Hysteresis in Layered Spring Magnets",
author="J. S. Jian and H. G. Kaper and G. K. Leaf",
journal="Discrete and Continuous Dynamical Systems - Series B",
volume="1",
issue="2",
year="2001",
pages="219-232",
@techreport{GerGilMue01:snadiopt,
title="Users Guide for SnadiOpt: A Package Adding Automatic Differentiation to Snopt",
author="W. M. Gertz and P. E. Gill and J. Muetherig",
number="ANL/MCS-TM-245",
month="January",
year="2001",
institution="Argonne National Laboratory"}
@techreport{Wri01:finiteprec,
title="Effects of Finite-Precision Arithmetic on Interior-Point Methods for Nonlinear Programming",
author="S. J. Wright",
number="Preprint ANL/MCS-P705-0198",
month="Jan. 2001",
institution="Argonne National Laboratory"}
@techreport{BenYe01:dual,
title="DSDP3: Dual Scaling Algorithm for General Positive Semidefinite Programming",
author="S. J. Benson and Y.Ye",
number="Preprint ANL/MCS-P851-1000",
month ="February",
institution="Argonne National Laboratory"}
@techreport{iDolMor01:optprofiles,
title="Benchmarking Optimization Software with Performance Profiles",
author="E. D. Dolan and J. J. More'",
number="Preprint ANL/MCS-P861-1200",
month="January",
year="2001",
institution="Argonne National Laboratory"}
@techreport{Ger01:quasi-new,
title="A Quasi-Newton Trust-Region Method",
author="E. M. Gertz",
number="Preprint ANL/MCS-P873-0201",
month="February",
year="2001"}
@article{SheWagTilMin01:davidson,
title="The Subspace Projected Approximate Matrix (SPAM) Modification of the Davidson Method",
author="R. Shepard and A. F. Wagner and J. L. Tilson and M. Minkoff",
journal="Journal of Computational Physics",
volume = "172",
issue = "2",
month = "September",
pages = "472-514",
year=" 2001"}
@techreport{Wri01:opt-grids,
title="Solving Optimization Problems on Computational Grids",
author = "S. J. Wright",
number="ANL/MCS-P874-0101",
month = "January",
year = "2001"}
@techreport{LinWri01:decomp,
author="J. Linderoth and S. Wright"
title="Decomposition Algorithms for Stochastic Programming on a Computational Grid",
number = "ANL/MCS-P875-0401",
month="April",
year="2001"}
@article{ColGalKap01:ferrowaves,
title="Waves in Ferromagnetic Medi",
journal="Commun. in PDEs",
volume="27",
issue="7-8",
pages="1625-1658",
year="2002"}
@inproceedings{OngLusGro01:scalableunix,
title="Scalable Unix Commands for Parallel Processors: A High-Performance Implementation",
author="E. Ong and E. Lusk and W. Gropp",
month = "September",
year="2001"}
pages="410-418",
book="Recent Advances in Parallel Virtual Machine and Message Passing Interface, Lecture Notes in Computer Science, Vol. 2131",
editor = "Y. Cotronis and J. Dongarra",
publisher = "Springer-Verlag"}
@techreport{DolMun01:kestrel,
title="The Kestrel Interface to the NEOS Server",
number="ANL/MCS-TM-248",
institution = "Argonne National Laboratory",
year = "2001"}
@techreport{BerGalIliLay01:largeeddy,
author="L. C. Berselli and G. P. Galdi and T. Iliescu and W. J. Layton",
title="Mathematical Analysis for the Rational Large Eddy Simulation Model",
number="ANL/MCS-P914-1001",
month="October",
year="2001"}
@article{ThaGroLus2002:optimizing,
title="Optimizing Noncontiguous Accesses in MPI-IO",
author = "R. Thakur and W. Gropp and E. Lusk",
journal = "Parallel Computing",
volume = "28",
year = "2002",
pages = "83-105"}
@techreport{IliFis02:rationalles,
title="Large Eddy Simulation of Turbulent Channel Flows by the Rational LES Model",
author = "T. Iliescu and P. Fischer",
number = "ANL/MCS-P938-0302",
month = "March",
year="2002"}
@techreport{GerWri02:ooqp,
author="E. M. Gertz and S. Wright",
title="OOQP User Guide",
number="ANL/MCS-TM-252",
month = "October",
year ="2001"}
@techreport{NorBalBenFreHovMcISmi02:pdes,
title="Parallel Components for PDEs and Optimization: Some Issues and Experiences",
month="February",
number="ANL/MCS-P932-0202",
year="2002"}
@article(ResLea02:noise,
author ="J. M. Restrepo and G. K. Leaf",
title="Noise Effects on Wave-Generated Transport Induced by Ideal Waves",
journal = "J. Physical Oceanography",
volume="12",
year="2002",
pages = "2334-2349"}
@article{LeaObuSchVin02:pinning,
title="Transient Dynamics of Pinning of Domain Wall",
author="G. K. Leaf and S. Obukhov and S. Scheidl and V. M. Vinokur",
journal ="J. Magnetism and Magnetic Mat.},
volume = "241",
year = "2002",
pages = "118-123"}
@techreport{RodAulMarNefYuMal03:gadu,
title="GADU -- Genome Analysis and Database Update Pipeline",
author="A. Rodriguez and D. Aulakhe and E. Marland and V. Nefedova and G. X. Yu and N. Maltsev",
year = "2003",
month = "February",
number="ANL/MCS-P1029-0203"}
@techreport{Ley03:penalty,
title="The Penalty Interior-Point Method Fails to Converge",
author="S. Leyffer",
year = "2003",
month = "September",
number="ANL/MCS-P1091-0903"}
@techreport{NauWal03:adtool,
title="An Introduction to Using Software Tools for Automatic Differentiation",
author="U. Naumann and A. Walther",
year = "2003",
month = "July",
number="ANL/MCS-TM-254"}
@techreport{NeuUtk03:reduction,
author = "U. Naumann and J. Utke",
title="Reduction of Edge Labeled DAGs through Constant Folding",
number="ANL/MCS-P1073-0903",
month="September",
year="2003"}
@techreport{AniHar02:multibody,
title="Solving Nonconvex Problems of Multibody Dyamics with Contact and Small Friction by Successive Convex Relaxation",
author = "M. Anitescu and G. D. Hart",
number="ANL/MCS-P995-0902",
year = "2002",
month="September"}
@techreport{AniHar02:timestep,
author="M. Anitescu and G. D. Hart',
title="A Constraint Stabilized Time-Stepping Approach for Multibody Dynamics with Contact and Small Friction",
number ="ANL/MCS-P1002-1002",
month="October",
year="2002"}
@techreport{YuMar02:knowbase,
author="G. X. Yu and E. Marland",
title="Establishment of a Knowledge Base for Function Annotation in High-Throughput Sequence Analysis",
number ="ANL/MCS-P1004-1002",
month="October",
year="2002"}
@article{Lyn03:lat-notes,
author="J. N. Lyness",
title="Notes on Lattice Rules",
journal="J. Complexity",
volume="19",
year ="2003",
pages ="321-331"}
@techreport{ThaGro03:mpich-collect,
author="R. Thakur and W. Gropp",
title="Improving the Performance of Collective Operations in MPICH",
number="ANL/MCS-P1038-0405",
month="April",
year="2003"}
@techreport{LynMon02:hypersing,
author="J. N. Lyness and G. Monegato",
title="Asymptotic Expansions for Two-Dimensional Hypersingular Integrals",
number="ANL/MCS-P1011-1102",
month="November",
year="2002"}
@techreport{LiLiaoChoRosThaGroLat03:netcdf,
author = "J. Li and W.-K. Liao and A. Choudhary and R. Ross and R. Thakur and W. Gropp and R. Latham",
title="Parallel netCDF: A Scientific High-Performance I/O Interface",
number = "ANL/MCS-P1048-0503",
month="May",
year ="2003"}
@techreport{GriLeaKapKarCam03:nanopart,
title="Normal Modes of Spin Excitations in Magnetic Nanoparticles",
author= "M. Grimsditch and G. K.Leaf and H. G. Kaper and D. A. Karpeev and R. E. Camley",
number ="ANL/MCS-P1049-0503",
month = "May",
year = "2003"}
@article{ZagKapKap03:csp,
title="Analysis of the Computatioal Singular Perturbation Reduction Method for Chemical Kinetics",
author="A. Zagaris and H. G. Kaper and T. J. Kaper",
journal="J. Nonlinear Sci.",
volume="14",
pages ="59-91",
year ="2004"}
@article{MccPadRosVero4:orth,
title="Automated Discovery of Single Axioms for Ortholattices",
author="W. McCune and R. Padmanabhan and M. A. Rose and R. Veroff",
journal="Algebra univers.",
volume="52",
pages ="541-549",
year ="2004"}
@techreport{LynSor03:4d,
title="Four-Dimensional Lattice Rules Generated by Skew-Circulant Matrices",
author="J. N. Lyness and T. Sorevik",
number = "ANL/MCS-P1012-0702",
month = "January",
year="2003"}
@techreport{LotFis03:multisch,
title="Hybrid Multigrid/Schwarz Algorithms for the Spectral Element Method",
author = "J. W. Lottes and P. F. Fischer",
number = "ANL/MCS-P1052-0403",
month="April",
year = "2003"}
@techreport{LynJoe02:upperclass,
title="The Number of Lattice Rules of Specified Upper Class and Rank",
author="J. N. Lyness and S. Joe",
number="ANL/MCS-P979-0802",
month="August",
year="2002"}
@techreport{HovNauNor02:semantic,
author = "P. D. Hovland and U. Naumann and B. Norris",
title="An XML-Based Platform for Semantic Transformation for Numerical Programs",
unumber="ANL/MCS-P950-0402",
month="April",
year ="2002"}
@techreport{BenMun03:flex,
author="S. J. Benson and T. S. Munson",
title="Flexible Complementarity Solvers for Large-Scale Applications",
number="ANL/MCS-P1055-0603",
month="June",
year="2003"}
@techreport{Nau03:tanglin,
author="U. Naumann",
title="Statement-Level Optimality of Tangent-Linear and Adjoint Models",
number="ANL/MCS-P-1066",
month="June",
year="2003"}
@techreport{MorMun02:mounts,
title="Computing Mountain Passes and Transition States",
author="J. J. More' and T. S. Munson",
number="ANL/MCS-P957-0502",
month="May",
year="2002"}
@techreport{DolFouGouMun:kest,
title="Kestrel: An Interface from Modeling Systems to the NEOS Server",
author="E. D. Dolan and R. Fourer and J.-P. goux and T. S. Munson",
number = "ANL/MCS-P986-0802",
month="August",
year="2002"}
@techreport:PauCroFis02:ramp,
title="Rayleigh-Benard Convection with a Radial Ramp in Plate Separation",
author="M. R. Paul and M.C. Cross and P. F. Fischer",
number = "ANL/MCC-P982-0802",
month="August",
year="2002"}
@techreport{FriSau02:lcl,
title="A Globally Convergent LCL Method for Nonlinear Optimization",
author="M. P. Friedlander and M. A. Saunders",
number="ANL/MCS-P1015-1202",
month="December",
year="2002"}
@techreport{Nau02:singleex,
title="On Optimal Jacobian Accumulation for Single Expression Use Programs",
author="U. Naumann",
number ="ANL/MCS-P944-0402",
month = "April",
year="2002"}
@techreport{MciNorBhoRag02:implicitcfd,
title="Adaptive Sparse Linear Solvers for Implicit CFD Using Newton-Krylov Algorithms",
author="L. McInnes and B. Norris and S. Bhowmick and P. Raghaven",
number = "ANL/MCS-P998-0902",
month = "September",
year="2002"}
@techreport{NoThaCho03:sdms,
title="High-Performance Scientific Data Management System",
author="J. No and R. Thakur and A. Choudhary",
number="ANL/MCS-P973-0502",
month="April",
year="2003"}
@techreport{VilRosCarThaSivKan02:posix,
title="Improving the Performance of the POSIX I/O Interface to PVFS",
author="M. Vilayannur and R. B. Ross and P. H. Carns and R. Thakur and A. Sivasubramaniam and M. Kandemir",
number="ANL/MCS-P1010-1102",
month="November",
year="2002"}
@techreport{EvaBaiHooGro03:soft,
title="Toward Understanding Soft Faults in High-Performance Cluster Networks",
author="J. J. Evans and S. Baik and C. S. Hood and W. Gropp",
number="ANL/MCS-P1017-0103",
month="January",
year="2003"}
@techreport{Gro02:libcomp,
title=""Building Library Components That Can Use Any MPI Implementation",
author="W. Gropp",
number="ANL/MCS-P956-0502",
month="May",
year="2002"}
@techreport{Ley03:mathcomp,
title="Mathematical Programs with Complementarity Constraints",
author="S. Leyffler",
number="ANL/MCS-P1026-0203",
month="February",
year ="2003"}
@techreport{HovKeaMciNorFreRag03:qoscomp,
author="P. Hovland and K. Keahey and L. C. McInnes and B. Norris and L. Freitag and P. Raghaven",
title ="A Quality-of-Service Architecture for High-Performance Numerical Components",
number="ANL/MCS-P1028-0203",
month="February",
year ="2003"}
@techreport{AniMilHar03:timestep,
title="Constraint Stabilization for Time-Stepping Approaches for Rigid Multibody Dynamics with Joints, Contact, and Friction",
author="M. Anitescu and A. Miller and G. D. Hart",
number="ANL/MCS-P1023-0403",
month="April",
year="2003"}
@techreport{BynGroSunTha03:mpidd,
author="S. Byna and W. Gropp and X.-H. Sun and R. Thakur",
title="Improving the Performance of MPI Derived Datatypes by Optimizing Memory-Access Cost",
number="ANL/MCS-P1045-0403',
month="April",
year=" 2003"}
@techreport{LeeRagSchFis03:sem,
title="An O(n log n) Solution Algorithm for Spectral Element Methods",
author="I. Lee and P. Raghavan and S. Schofield and P. Fischer",
number="ANL/MCS-P1041-0403",
month="April",
year="2003"}
@techreport{Ani03:fixedtime,
author="M. Annitescu",
number="ANL/MCS-P1034-0303",
title="A Fixed Time-Step Approach for Multibody Dynamics with Contact and Friction",
month="March",
year="2003"}
@techreport{Zho03:iigd,
title="Eigenvalue Computation from the Optimization Perspective: On Jacobi-Davidson, IIGD, RQI, and Newton Updates,"
author="Y. Zhou",
number="ANL/MCS-P1074-0803",
month="August",
year="2003"}
@techreport{BenkriMciNieSar03:gatao,
title="Using the GA and TAO Toolkits for Solving Large-Scale Optimization Problems on Parallel Computers",
author="S. Benson and M. Krishnan and L. McInnes and J. Nieplocha and J. Sarich",
number="ANL/MCS-P1084-0903",
month="September",
year="2003"}
@techreport{AniLayPpah03:impexp,
title="Unconditional Stability for Numerical Scheme Combining Implicit Timestepping for Local Effects and Explicit Timestepping for Nonlocal Effects",
author="M. Anitescu and W. J. Layton and F. Pahlevani",
number="ANL/MCS-P1093-0903",
month="September",
year="2003"}
@techreport{HarAni03:hardcon,
title="A Hard-Constraint Time-Stepping Approach for Rigid Multibody Dynamics with Joints, Contact, and Friction",
author="G. D. har and M. Anitescu",
number="ANL/MCS-P1099-1033",
month="October",
year="2003"}
@techreport{Liuetal03:rdma,
title="Design and Implementation of MPICH2 over InfiniBand with RDMA Support",
author="J. Liu and W. Jiang and P. Wyckoff and D. K. Panda and D. Ashton and D. Buntinas and W. Gropp and B. Toonen",
number="ANL/MCS-P1103-1003",
month="October",
year="2003"}
@techreport{OzgFisDuaIli03:nonhydro,
title="Three-Dimensional Turbulent Bottom Density Currents from a High-Order Nonhydrostatic Spectral Element Model",
author="T. Ozgokmen and P. Fischer and J. Duan and T. Iliescu",
number="ANL/MCS-P1106-1103",
month ="November",
year="2003"}
@techreport{NauGot03:optimalpivot,
title="Simulated Annealing for Optimal Pivot Selection in Jacobian Accumulation",
author="U. Naumann and P. Gottschling",
number="ANL/MCS-P1032-0303",
month="March",
year="2003"}
@techreport{MooSanSteKiz03:ionic,
title="Computational Modeling of Ionic Transport in Continuous and Batch Electrodialysis",
author="P. J. Moon and G. Sandi and D. Stevens and R. Kizilel",
number="ANL/MCS-P1111-1203",
month="December",
year="2003"}
@techreport{PanLey03:value,
title="On the Global Minimization of the Value-at-Rosk",
number="ANL/MCS-P1112-1203",
author="J.-S. Pang and S. Leyffer",
month="December",
year="2003"}
@techreport{ZagKapKap04:fast,
title="Fast and Slow Dynamics for the Computational Singular Perturbation method",
author="A. Zagaris and H. G. Kaper and T. J. Kaper",
number = "ANL/MCS-P1114-0104",
month = "January",
year="2004"}
@techreport{Dun03:eddy,
title="Optimal Design of Fluid Flow Using Subprobvlems Reduced by Large Eddy Simulation",
author="A. A. Dunca",
number="ANL/MCS-P1117-1003",
month="October",
year ="2003"}
@techreport{ChiChoLiaRosGro04:structured,
title="Evaluating Structured I/O Methods for Parallel File Systems",
author="A. Ching and A. Choudhary and W.-K. Liao and R. Ross and W. Gropp",
number="ANL/MCS-P1125-0204",
month="February",
year ="2004"}
@techreport{RosMilGro03:datatype,
title="Implementing Fast and Reusable Datatype Processing",
author="R. Ross and N. Miller and W. Gropp",
number="ANL/MCS-P1068-0703",
month="July",
year="2003"}
@techreport{GriGioMonNizLeaKap04:ferro,
title="Normal Modes in Ferromagnetic nanoparticles: A Dynamical Matrix Approach",
author="M. Grimsditch and L. Giovannini and F. Montoncello and F. Nizzoli and G. K. Leaf and H. G. Kaper",
number = "ANL/MCS-P1116-0104",
month="January",
year="2004"}
@techreport{KawGuoThoWagMin04:zeroth,
A. Kawano and Y. Guo and D. L. Thompson and A. L. Wagner and M. Minkoff",
title="Improving the Accuracy of Interpolated Potential Energy Surfaces by Using an Analytical Zeroth-Order Potential Function",
number="ANL/MCS-P1137-0304",
month="March",
year="2004"}
@techreport{Nau03:dual,
title="Optimal Accumulation of Jacobian Matrices by Elimination Methods on the Dual Computational Graph",
author="U. Naumann",
number="ANL/MCS-P943-0402",
month="April",
year="2003"}
@techreport{NauHei03:coupling,
title="Coupling Tangent-Llinear and Adjoint Models",
author="U. Naumann and P. Heimbach",
number="ANL/MCS-P1022-0203",
month="June",
year="2003"}
@techreport{Kennyetal04:chemopt,
title="Component-Based Integration of Chemistry and Optimization Software",
author="J. P. Kenny and S. J. Benson and Y. Alexeev and J. Sarich and C. L. Janssen and L. C. McInnes and M. Krishnan and J. Nieplocha and E. Jurrus and C. Fahlstrom and T. L. Windus",
number="ANL/MCS-P1148-0404",
month="April",
year="2004"}
@techreport{Ani04:elastic,
title="Global Convergence of an Elastic Mode Approach for a Class of Mathematical Programs with Complementarity Constraints",
author="M. Anitescu",
number ="ANL/MCS-P1143-0404",
month="April",
year="2004"}
@techreport{PauChiCroFis04:largeasp,
title="Rayleigh-Benard Convection in Large-Aspect-Ratio Domains",
author="M. R. Paul and K-H. Chiam and M. C. Cross and P. F. Fischer",
number = "ANL/MCS-P1144-0404",
month="April",
year="2004"}
@techreport{NauRie03:diff-for,
title="A Differentiation-Enabled Fortran 95 Compiler",
author="U. Naumann and J. Riehme",
number="ANL/MCS-P1090-0903",
month="September",
year="2003"}
@techreport{AlbGotNau02:mark-jacob,
title="Markowitz-Type Heuristics for Computing Jacobian Matrices Efficiently",
author="A. Albrecht and P. Gottschling and U. Naumann",
number="ANL/MCS-P933-0202",
month="February",
year="2002"}
@techreport{YuBunGraPan04:myr,
title="Efficient and Scalable Barrier over Quadrics and Myrinet with a New NIC-based Collective Message-Passing Protocol",
author="W. Yu and D. Buntinas and R. L. Graham and D. K. Panda",
number="ANL/MCS-P1121-0204",
month="February",
year="2004"}
@inproceedings{CohNayRie03:comptech,
booktitle="Proc. ACM Symp. on Applied Computing,"
address="Melbourne, FL",
pages="143-147",
title="Towards Differentiation-Enabled Fortran 95 Compiler Technology",
author="M. Cohen and U. Naumann and J. Riehme",
year="2003"}
@techreport{HasNauPas03:tbr,
title="TBR Analysis in Reverse-Mode Automatic Differentiation",
author="L. Hascoet and U. Naumann and V. Pascual",
number="ANL/MCS-P936-0202",
month="February",
year="2003"}
@techreport{WuWycPanRos04:unifier,
title="Unifier: Unifying Cache Management and Communication Buffer Management for PVFS over InfinBand",
author="J. Wu and P. Wyckoff and D. Panda and R. Ross",
number="ANL/MCS-P1122-0204",
month=February",
year ="2004"}
@techreport{ThaRabGro04:collcomm,
author="R. Thakur and F. Rabenseifner and W. Gropp",
title="Optimization of Collective Communication Operations in MPICH",
number="ANL/MCS-P1140-0304",
month="March",
year="2004"}
@techreport{DemPriNogSch04:mpecs,
title="An Interior-Point Method for MPECs Based on Strictly Feasible Relaxation",
author="A.-V. Demiguel and M. P. Friedlander and F. J. Nogales and S. Scholtes",
number="ANL/MCS-P1150-0404",
month="April",
year="2004"}
@techreport{GroLus04:fault,
title="Fault Tolerance in MPI Programs",
author="W. Gropp and E. Lusk",
number="ANL/MCS-P1154-0404",
month="April",
year="2004"}
@techreport{DolMorMun04:optimal,
title="Optimality Measures for Performance Profiles",
author="E. D. Dolan and J. J. More' and T. S. Munson",
number="ANL/MCS-P1155-0504",
month="May",
year="2004"}
@techreport{PenAniAke04:robotsys,
author="J. Peng and M. Anitescu and S. Akella",
title="Optimal Control of Multiple Robot Systems with Friction Using MPCC",
number="ANL/MCS-P1157-0504",
month="April",
year="2004"}
@techreport{ThaGroToo04:onesided,
author="R. Thakur and W. Gropp and B. Toonen",
title="Minimizing Synchronization Overhead in the Implementation of MPI One-Disded Communication",
number="ANL/MCS-P1158-0504",
month="May",
year="2004"}
@techreport{NauUtkLyo04:flowrev,
author="U. Naumann and J. Utke and A. Lyon",
title="Control Flow Reversal for Adjoint Code Generation",
number="ANL/MCS-P1163-0504",
month="May",
year="2004"}
@techreport{Utke04:openad,
title="OpenAD" Algorithm Implementation User Guide",
author="J. Utke",
number="ANL/MCS-TM-274",
month="April",
year="2004"}
@techreport{LatRosTha04:impactio,
author="R. Latham and R. Ross and R. Thakur",
title="The Impact of File Systems on MPI-IO Scalability",
number="ANL/MCS-P1182-0604",
month="June",
year="2004"}
@techreport{Jiaetal04:passive,
title="Efficient Implementation of MPI-2 Passive One-Sided Communication on InfiniBand Clusters",
author="W. Jiang and K. Liu and H.-W. Jin and D. K. Panda and D. Buntinas and R. Thakur and W. Gropp"
number="ANL/MCS-P1164-0504",
month="May",
year="2004"}
@techreport{LeeMaRosThaWin04:rfs,
title="RFS: Efficient and Flexible Remote File Access for MPI-IO",
author="J. Lee and X. Ma and R. Ross and R. Thakur and M. Winslett",
number="ANL/MCS-P1176-0604",
month="June",
year = "2004"}
@techreport{BenMciMorSar04:scalopt,
title="Scalable Algorithms in Optimization: Computational Experiments",
author="S. J. Benson and L. McInnes and J. J. More' and J. Sarich",
month="June",
number="ANL/MCS-P1175-0604",
year="2004"}
@techreport{AniHar04:fric,
title="A Fixed-Point Iteration Approach for Multibody Dynamics with Contact and Small Friction",
author="M. Anitescu and G. D. Hart",
number="ANL/MCS-P985-0802",
month = "February",
year = "2004"}
@techrepport{PotAniGavTri04:joints,
title="A Linearly Implicit Trapezoidal Method for Integrating Stiff Multibody Dynamics with Contact, Joints, and Friction",
author="F. A. Potra and M. Anitescu and B. Gavrea and J. Trinkle",
number="ANL/MCS-P1162-0504",
month="May",
year="2004"}
@techreport{Ani04:nonsmooth,
title="Optimization-Based Simulation of Nonsmooth Rigid Multibody Dynamics",
author="M. Anitescu",
number="ANL/MCS-P1161-0504",
month="May",
year="2004"}
@techreport{BisHovNor04:adtools,
title="On the Implementation of Automatic Differentiation Tools",
author="C. H. Bischof and P. D. Hovland and B. Norris",
number="ANL/MCS-P1152-0404",
month="April",
year="2004"}
@techreport{LeeHov04:derivative,
title="Derivative Techniques for Forward Sensitivity Analysis in Time-Dependent Problems",
author="S. L. Lee and P. D. Hovland",
number="ANL/MCS-P1153-0404",
month="April",
year="2004"}
@techreport{YuBunPan04:alltoall,
title="Scalable High-Performance NIC-Based All-to-All Broadcast over Myrinet/GM",
author="W. Yu and D. Buntinas and D. K. Panda",
number="ANL/MCS-P1177-0604",
month="June",
year="2004"}
@techreport{mpisyssoft,
author="N. Desai and R. Bradshaw and A. Lusk and E. Lusk",
title ="MPI Cluster System Software",
number="ANL/MCS-P1160-0504",
month="May",
year="2004"}
@techreport{Mun04:nash,
title="An Averaging Method for Nash Games with Hsared Decision Variables",
author="T. Munson",
number="ANL/MCS-P1134-0304",
month="March",
year="2004"}
@techreport{StrHov04:metrics,
title="Metrics and Models for Reordering Transformations",
author="M. M. Strout and P. D. Hovland",
number="ANL/MCS-P1167-0604",
month="June",
year="2004"}
@techreport{DiaKnuMunSho04:inexact,
title="A Comparison of Inexact Newton and Coordinate Descent Mesh Optimization Techniques",
author = "L. F. Diachin and P. Knupp and T. Munson and S. Shontz",
number = "ANL/MCS-P1159-0504",
month="May",
year="2004"}
@techreport{DolMorMun04:cops3,
title="Benchmarking Optimization Software with COPS 3.0",
author="E. D. Dolan and J. J. More' and T. S. Munson",
number="ANL/MCS-TM-273",
month="February",
year="2004"}
@techreport{Ani04:nonsmooth,
title="Optimization-Based Simulation of Nonsmooth Rigid Multibody Dynamics",
author="M. Anitescu",
number="ANL/MCS-P1161-0504",
month="May",
year="2004"}
@inbook{LigRos04:parallelio,
title="Parallel I/O and the Parallel Virtual File System",
author="W. Ligon and R. Ross",
booktitle="Beowulf Cluster Computing with Linux",
editor = " W. Gropp and E. Lusk and T. Sterling",
publisher="MIT Press",
year ="2003"}
@techreport{GroRosMil04:redundancy,
title="Providing Efficient I/O Redundancy in MPI Environments",
author="W. Gropp and R. Ross and N. Miller",
number="ANL/MCS-P1178-0604",
month="June",
year="2004"}
@techreport{Almetal04:bluegene,
title="The Design and Implementation of Message Passing Services for the BlueGene/L Supercomputer",
author="G. Almasi and C. Archer and J. G. Castanos and J. Gunnels and C. Erway and P. Heidelberger and X. Martorell and J. E. Moreira and K. Pinnow and J. Ratterman and B. Steinmacher-burow and W. Gropp and B. Toonen",
number="ANL/MCS-P1183-0604",
month="June",
year="2004"}
@techreport{Mun04:inverse-mean,
title="Mesh Shape-Quality Optimization Using the Inverse Mean-Ratio Metric",
author="T. Munson",
number="ANL/MCS-P1136-0304",
month="April",
year="2004"}
@techreport{McIetal04:pde-based,
title="Parallel PDE-Based Simulations Using the Common Component Architecture",
author="L. C. McInnes and others",
number="ANL/MCS-P1179-0704",
month="July",
year="2004"}
@techreport{Mun04:inverse-mean,
title="Mesh Shape-Quality Optimization Using the Inverse Mean-Ratio Metric",
author="T. Munson",
number="ANL/MCS-P1136-0304",
month="April",
year="2004"}
@techreport{MinLeeFisGra04:fourier,
title="
Fourier Spectral Simulations and Gegenbauer Reconstructions for Electromagnetic Waves in the Presence of a Metal Nanoparticle",
author="M. S. Min and T. W. Lee and P. F. Fischer and S. K. Gray",
number="ANL/MCS-P1202-1004",
month="October",
year="2004"}
@techreport{CheHobLeyMun04:nox,
title="Leader-Follower Equilibria for Electric Power and NOx Allowances Markets",
author="Y. Chen and B. F. Hobbs and S. Leyfer and T. S. Munson",
number ="ANL/MCS-P1191-0804",
month="August",
year="2004"}
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