Selected Publications
M. Hereld, M. E. Papka, V. Vishwanath, "Toward Simulation-Time Data Analysis and I/O Acceleration on Leadership-Class Systems," Proc. IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV2011), Providence, RI, 2011, pp. 9-11. Also Preprint ANL/MCS-P1929-0911 September 2011. [pdf]
M. Hereld, J. A. Insley, E. C. Olson, M. E. Papka, V. Vishwanath, M. L. Norman, R. Wagner, "Exploring Large Data over Wide Area Networks," Proc. IEEE Symposium on Large-Scale Data Analysis and Visualization (LDAV2011), Providence, RI, 2011, pp. 133-134. Also Preprint ANL/MCS-P1932-0911 September 2011. [pdf]
V. Vishwanath, M, Hereld, V. Morozov, M. E. Papka, "Topology-Aware Data Movement and Staging for I/O Acceleration on Blue Gene/P Supercomputing Systems.," Proc. 2011 International Conference for High Performance Computing, Networking, Storage and Analysis, Seattle, Washington, ACM, 2011. Also Preprint ANL/MCS-P1936-0911 September 2011. [pdf]
S. Kumar, V. Vishwanath, P. Carns, B. Summa, G. Scorzelli, V. Pascucci, R. Ross, J. Chen, H. Kolla, and R. Grout, "PIDX: Efficient Parallel I/O for Multi-Resolution Multi-Dimensional Scientific Datasets," Proc. 2011 IEEEE International Conference on Cluster Computing (CLUSTER), Austin, Texas, 2011, pp. 103-111. Also Preprint ANL/MCS-P1916-0711 July 2011. [pdf]
J. Leigh, A. Johnson, L. Renambot, V. Vishwanath, T. Peterka, N. Schwarz, "Visualization of Large-Scale Distributed Data," Data Intensive Distributed Computing, 2012. Also Preprint ANL/MCS-P1907-0611 June 2011. [pdf]
W. Tang, N. Desai, V. Vishwanath, D. Buettner, Z. Lan, "Job Coscheduling on Coupled High-End Computing Systems," Proc. 40th International Conference on Parallel Processing Workshops, 2011, pp. 317-326. Also Preprint ANL/MCS-P1909-0611 June 2011. [pdf]
W. Wu, T. Uram, M. Wilde, M. Hereld, and M. E. Papka, "Accelerating Science Gateway Development with Web 2.0 and Swift," Preprint ANL/MCS-P1765-0610 June 2010. [pdf]
V. Vishwanath, M. Hereld, K. Iskra, D. Kimpe, V. Morozov, M. E. Paper, R. Ross, and K. Yoshii, "Accelerating I/O Forwarding in IBM Blue Gene/P Systems," SC 10, New Orleans, Louisiana, 2010, pp. 1-10. April 2010. [pdf]
M. Hereld, J. Insley, E. Olson, M. E. Papka, T. Uram, and V. Vishwanath, "Modeling Resource-Coupled Computations," Preprint ANL/MCS-P1724-0210 February 2010. [pdf]
W. Wu, T. Uram, and M. E. Papka, "Web 2.0 Based Social Informatics Data Grid," Proceedings of the 5th Grid Computing Environments Workshop, Portland, Oregon, USA, ACM, 2009. Also Preprint ANL/MCS-P1686-1009 October 2009. [pdf]
S. Nam, S. Deshpande, V. Vishwanath, B. Jeong, L. Renambot, and J. Leigh, "Multi-Application Inter-Tile Synchronization on Ultra-High-Resolution Display Walls," Proceedings of the first annual ACM SIGMM conference on Multimedia systems, Phoenix, Arizona, USA, ACM, 2010, pp. 145-156. Also Preprint ANL/MCS-P1678-0909 September 2009. [pdf]
R. T. Fisher, L. Kadanoff, D. Q. Lamb, A. Dubey, T. Plewa, A. Calder, F. Cattaneo, P. Constantin, I. Foster, M. E. Papka, S. I. Abarzhi, S. M. Asida, P. M. Rich, C. C. Glendenin, K. Antypas, D. J. Sheeler, L. B. Reid, B. Gallagher and S. G. Needham, "Terascale Turbulence Computation on BG/L Using the FLASH3 Code," IBM Journal of Research and Development, vol. 52, no. 1, 2008, pp. 127 - 136. Also Preprint ANL/MCS-P1401-0307 March 2007. [pdf]
S. Dong, J. Insley, N. T. Karonis, M.E.Papka, J.Binns, and G.Karniadakis, "Simulating and Visualizing the Human Arterial System on the TeraGrid," Future Generation Computing System, vol. 22, no. 8, 1969, pp. 1011-1017. Also Preprint ANL/MCS-P1344-0506 October 2006. [pdf]
M. Hereld, R. L. Stevens, W. van Drongelen, H. C. Lee, "Framework for Interactive Million-Neuron Simulation," Journal of Clinical Neurophysiology, vol. 24, no. 2, 2007, pp. 189-196. Also Preprint ANL/MCS-P1360-0706 July 2006. [pdf]
W. van Drongelen, H. C. Lee, R. L. Stevens, M. Hereld, "Propagation of Seizurelike Activity in a Model of Neocortex," Preprint ANL/MCS-P1363-0706 July 2006. [pdf]
J. A. Insley, M. E. Papka, S. Dong, G. Karniadakis, and N. T. Karonis, "Runtime Visualization of the Human Arterial Tree," Preprint ANL/MCS-P1340-0406 April 2006. [pdf]
J. Binns, J. DiCarlo, J. A. Insley, T. Leggett, C. Lueninghoener, J.-P. Navarro, and M. E. Papka, "Enabling Community Access to TeraGrid Visualization Resources, Concurrency and Computation: Practice and Experience," Concurr. Comput.-Pract. Exp., vol. 19, no. 6, 1969, pp. 783 - 794. Also Preprint ANL/MCS-P1334-0306 March 2006. [pdf]
R. Judson, S. Lefvert, E. Olson, T. D. Uram, "Virtual Venue Management Users Manual: Access Grid Toolkit Documentation, Version 2.3," Technical Memorandum ANL/MCS-TM-287 February 2006. [pdf]
M. Hereld, M. E. Papka, J. Binns, and R. L. Stevens, "CupHolder: A Multi-Person Interactive High-Resolution Workstation," Preprint ANL/MCS-P1322-0206 February 2006. [pdf]
I. R. Judson, E. Olson, S. D. Price, T. D. Uram, "Web Services Toolkit Interoperability," 2006. Also Preprint ANL/MCS-P1319-0106 January 2006. [pdf]
T. Disz, M. Kubal, R. Olson, R. Overbeek, R. Stevens, "Challenges in Large Scale Distributed Computing: Bioinformatics," Preprint ANL/MCS-P1238-0305 March 2005. [pdf]
K. Keahey, I. Foster, T. Freeman, X. Zhang, and D. Galron, "Virtual Workspaces in the Grid," Preprint ANL/MCS-P1231-0205 February 2005. [pdf]
A. Majumder and R. Stevens, "Perceptual Photometric Seamlessness in Projection-Based Tiled Displays," ACM Transactions on Graphics, vol. 24, no. 1, ACM, 2004, pp. 118-139. Also Preprint ANL/MCS-P1205-1104 November 2004. [pdf]
K. Keahey, M. E. Papka, Q. Peng, D. Schissel, G. Abla, T. Araki, J. Burruss, E. Feibush, P. Lane, S. Klasky, T. Leggett, D. McCune, L. Randerson, "Grid Support for Collaborative Control Room in Fusion Science," Preprint ANL/MCS-P1201-1004 October 2004. [pdf]
W. van Drongelen, H. C. Lee, M. Hereld, D. Jones, M. Cohoon, F. Elsen, M. E. Papka, and R. L. Stevens,, "Simulation of Neocortical Epileptiform Activity Using Parallel Computing," Neurocomputing, vol. 58, 2004, pp. 1203-1209. Also Preprint ANL/MCS-P1170-0604 June 2004. [pdf]
W. van Drongelen, H. C. Lee, M. Hereld, Z. Chen, F. P. Elsen, and R. L. Stevens, "Emergent Epileptiform Activity in Neural Networks with Weak Excitatory Synapses," IEEE Trans. Neural Syst. Rehab. Eng., vol. 13, no. 2, IEEE Engineering in Medicine and Biology Society, 2004, pp. 236-241. Also Preprint ANL/MCS-P1171-0604 June 2004. [pdf]
W. van Drongelen, H. C. Lee, H. Koch, F. Elsen, M. S. Carroll, M. Hereld, R. L. Stevens,, "Interaction between Cellular Voltage-Sensitive Conductance and Network Parameters in a Model of the Neocortex Can Generate Epileptiform Bursting," Proc. IEEE 26th Annual International Conference of Engineering in Medicine and Biology Society, vol. 2, no. 1, 2004, pp. 4003-4005. Also Preprint ANL/MCS-P1172-0604 June 2004. [pdf]
M. Hereld, R. L. Stevens, W. van Drongelen, H. C. Lee, "Developing a Petascale Neural Simulation," Conf Proc IEEE Eng Med Biol Soc. 2004, vol. 6, 2004, pp. 3999-4002. Also Preprint ANL/MCS-P1147-0404 April 2004. [pdf]
D.P. Schissel, K.Keahey, T.Araki, J.R. Burruss, E.Feibush, S.M.Flanagan, T. W. Fredian, M. J. Greenwald, S. A. Klasky, T. Leggett, K. Li, D. C. McCune, P. Lane, M. E. Papka, Q. Peng, L. Randerson, A.Sanderson, J.Stillerman, M. R. Thompson, G. Wallace, "The National Fusion Collaboratory Project: Applying Grid Technology for Magnetic Fusion Research," 2004. Also Preprint ANL/MCS-P1133-0304 March 2004. [pdf]
K. Keahey, M. E. Papka, Q. Peng, D. Schissel, G. Abla, T. Araki, J. Burruss, S. Feibush, P. Lane, S. Klasky, T. Leggett, D. McCune, and L. Randerson, "Grids for Experimental Science: The Virtual Control Room," 2004. Also Preprint ANL/MCS-P1139-0304 March 2004. [pdf]
H. Gao, I. R. Judson, T. Uram, T. L. Disz, M. E. Papka, R. L. Stevens, "Capability Matching of Data Streams with Network Services," Proceedings of the 2004 IEEE International Symposium on Cluster Computing and the Grid, 2004. Also Preprint ANL/MCS-P1118-0104 January 2004. [pdf]
M. Hereld, "Local Methods for Measuring Tiled Display Alignment," Preprint ANL/MCS-P1072-0803 August 2003. [pdf]
R. Stevens, M. E. Papka, and T. L. Disz, "Prototyping the Workspaces of the Future," IEEE Internet Computing, vol. 7, no. 4, IEEE Educational Activities Departm, 2003, pp. 51 - 58. July 2003. [pdf]
R. Stevens, M. E. Papka, T. Disz, "The Access Grid: Prototyping - Workspaces of the Future," Preprint ANL/MCS-P1064-0603 June 2003. [pdf]
N. T. Karonis, M. E. Papka, J. Binns, J. Bresnahan, J. A. Insley, D. Jones, J. M. Link, "High-Resolution Remote Rendering of Large Datasets in a Collaborative Environment," Future Generation Computer Systems, vol. 19, 2003, pp. 900-917. Also Preprint ANL/MCS-P1030-0203 February 2003. [pdf]
M. Hereld, I. R. Judson, R. Stevens, "Application Performance Evaluation of the HTMT Architecture," Technical Memorandum ANL/MCS- TM-258 January 2003. [pdf]
A. Majumder and R. Stevens, "LAM: Luminance Attenuation Map for Photometric Uniformity in Projection Based Displays," Proceedings of the ACM symposium on Virtual reality software and technology, Hong Kong, China, ACM, 2002, pp. 147 - 154. Also Preprint ANL/MCS-P992-0902 September 2002. [pdf]
I. R. Judson, "Access Grid Node Minimum Requirements," Technical Memorandum ANL/MCS-TM-257 April 2002. [pdf]
R. Stevens, "Computational Science Experiences on the Intel Touchstone DELTA Supercomputer," Proceedings of the thirty-seventh international conference on COMPCON, San Francisco, California, United States, IEEE Computer Society Press, 1992, pp. 295 - 299. January 1992. [pdf]
J.C. Silverstein, C. Walsh, F. Dech, E. Olson, M. Papka, N. Parsad, and R. Stevens, "Multi-Parallel Open Technology to Enable Collaborative Volume Visualization," .
R. Stevens, "Visualization Challenges at the Intersection of Petascale Computing and Biological Science," IEEE Visualization 2007, Sacramento, CA, 2007. .
J.C. Silverstein, C. Walsh, F. Dech, E. Olson, M.E. Papka, N. Parsad, R.L. Stevens, "Immersive Virtual Anatomy course Using a Cluster of Volume Visualization Machines and Passive Stereo," Medicine Meets Virtual Reality 15 (MMVR15) Conference,, 2007. .
G.R. Gao, T. Sterling, R. Stevens, M. Hereld, and W. Zhu, "ParalleX: A Study of a New Parallel Computation Model," IEEE International Parallel and Distributed Processing Symposium, Rhodes Island, Greece, 2007, pp. 294. .
J. Binns, F. Dech, M.E. Papka, J.C. Silverstein, R. Stevens, "Developing a Distributed Collaborative Radiological Visualization Application," From Grid to Healthgrid: Proceedings of Healthgrid 2005, vol. 112, IOS Press, 2005, pp. 70-79. .
R. L. Grossman, M. Sabala, J. Alimohideen, A. Aanand, J. Chaves, J. Dillenburg, S. Eick, J. Leigh, P. Nelson, M. E. Papka, D. Rorem, R. Stevens, S. Vejcik, L. Wilkinson, and P. Zhang, "Real Time Change Detection and Alerts from Highway Traffic Data," .
M. Hereld and R. L. Stevens, "Large Neural Simulations on Large Parallel Computers ," International Journal of Bioelectromagnetism, vol. 7, 2005, pp. 44-46. .
M. Hereld and R.L. Stevens, "Pixel–Aligned Warping for Multi–Projector Tiled Displays," Proceedings of the 2005 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05), vol. 3, IEEE Computer Society, 2005, pp. 104. .
W. Xingfu, V. Taylor, J. Geisler, R. Stevens, "Isocoupling: Reusing Kernel Coupling Values to Predict the Performance of Parallel Applications," Proceedings International Parallel and Distributed Processing Symposium (IPDPS) 2004, vol. 1, Sante Fe, New Mexico, IEEE Computer Society, 2004, pp. 43b. .
M. Hereld, I. R. Judson, and R. Steven, "DottyToto: A Measurement Engine for Aligning Multi–Projector Display Systems," Projection displays IX, vol. 5002, Santa Clara, CA, Society of Photo-Optical Instrumentation Engineers, 2003, pp. 73-86. .
X. Wu, V. Taylor, X. Li, J. Geisler, Z. Lan, R. Stevens, M. Hereld, and I. R. Judson, "Design and Development of Prophesy Performance Database for distributed Scientific Applications," 10th SIAM Conference on Parallel Processing for Scientific Computing, 2001. .
Terrence Disz, Robert Olson, and Rick Stevens, "Performance Model of the Argonne Voyager Multimedia Server," Proceedings of the IEEE International Conference on Application-Specific Systems, Architectures and Processors, IEEE Computer Society, 1969, pp. 316. .
T. Disz, I. Judson, R. Olson, and R. Stevens, "The Argonne Voyager Multimedia Server," Proceedings of the 6th IEEE International Symposium on High Performance Distributed Computing, IEEE Computer Society, 1997, pp. 71-80. .
T.L. Disz, M.E. Papka, R. Stevens, "UBIWorld: An Environment Integrating Virtual Reality," Proceedings of the 6th Heterogeneous Computing Workshop (HCW '97), Geneva, Switzerland, IEEE Computer Society, 1997, pp. 46. .
V. E. Taylor, J. Chen, T. Canfield, and R. Stevens, "A Decomposition Method for Efficient Use of Distributed Supercomputers for Finite Element Applications," Proceedings of the IEEE International Conference on Application-Specific Systems, Architectures, and Processors, IEEE Computer Society, 1996, pp. 12-24. .
J.B. Drake, R.E. Flannery, D.W. Walker, P.H. Worley, I.T. Foster, J.G. Michalakes, R. L. Stevens, J. J. Hack, and D. L Williamson, "The Message–Passing Version of the Parallel Community Climate Model," Parallel Supercomputing in Atmospheric Sciences, World Scientific, 1993, pp. 500–513. .
A. Choudhary, M. Kandemir, J. No, G. Memik, X. Shen, W. Liao, H. Nagesh, S. More, V. Taylor, R. Thakur, and R. Stevens, "Data Management for Large–Scale Scientific Computations in High Performance Distributed Systems," Cluster Computing, vol. 3, no. 1, Kluwer Academic Publishers, 2000, pp. 45 - 60. .