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doi | = | {10.1103/PhysRevD.82.125030}, | |

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publisher | = | {American Physical Society} |

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title | = | {Comparative analysis of effectiveness of two timing-driven design approaches}, | |

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series | = | {MTPP'10}, | |

year | = | {2010}, | |

isbn | = | {3-642-14821-2, 978-3-642-14821-7}, | |

location | = | {Vladivostok, Russia}, | |

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author | = | {Erkan, A.N. and Camps-Valls, G. and Altun, Y.}, | |

booktitle | = | {Machine Learning for Signal Processing (MLSP), 2010 IEEE International Workshop on}, | |

title | = | {Semi-supervised remote sensing image classification via maximum entropy }, | |

year | = | {2010}, | |

month | = | {September}, | |

volume | = | {}, | |

number | = | {}, | |

pages | = | {313 -318}, | |

doi | = | {10.1109/MLSP.2010.5589199}, | |

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title | = | {A simple geometric model for elastic deformations}, | |

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series | = | {SIGGRAPH '10}, | |

year | = | {2010}, | |

isbn | = | {978-1-4503-0210-4}, | |

location | = | {Los Angeles, California}, | |

pages | = | {38:1--38:6}, | |

articleno | = | {38}, | |

numpages | = | {6}, | |

url | = | {http://doi.acm.org/10.1145/1833349.1778775}, | |

doi | = | {http://doi.acm.org/10.1145/1833349.1778775}, | |

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publisher | = | {ACM}, | |

address | = | {New York, NY, USA}, |

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title | = | {{Semi-supervised Learning via Generalized Maximum Entropy}}, | |

author | = | {Erkan, A. N.}, | |

school | = | {New York University}, | |

year | = | {2010}, | |

month | = | {September} |

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AUTHOR | = | {C\'edric H. David and David J. Gochis and David R. Maidment and Wei Yu and David N. Yates and Zong-Liang Yang}, | |

TITLE | = | {Using NHDPlus as the Land Base for the Noah-distributed Model} | |

JOURNAL | = | {T. GIS} | |

PAGES | = | {363-377}, | |

YEAR | = | {2009} |

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author | = | {Gauthier, M. and Poulin, P.}, | |

title | = | {Preserving sharp edges in geometry images}, | |

booktitle | = | {Proceedings of Graphics Interface 2009}, | |

series | = | {GI '09}, | |

year | = | {2009}, | |

isbn | = | {978-1-56881-470-4}, | |

location | = | {Kelowna, British Columbia, Canada}, | |

pages | = | {1--6}, | |

numpages | = | {6}, | |

url | = | {http://portal.acm.org/citation.cfm?id=1555880.1555890}, | |

acmid | = | {1555890}, | |

publisher | = | {Canadian Information Processing Society}, | |

address | = | {Toronto, Ont., Canada, Canada}, |

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author | = | {Gulati, Shilpa and Jhurani, Chetan and Kuipers, Benjamin and Longoria, Raul}, | |

title | = | {A framework for planning comfortable and customizable motion of an assistive mobile robot}, | |

booktitle | = | {Proceedings of the 2009 IEEE/RSJ international conference on Intelligent robots and systems}, | |

series | = | {IROS'09}, | |

year | = | {2009}, | |

isbn | = | {978-1-4244-3803-7}, | |

location | = | {St. Louis, MO, USA}, | |

pages | = | {4253--4260}, | |

numpages | = | {8}, | |

url | = | {http://portal.acm.org/citation.cfm?id=1732643.1732744}, | |

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title | = | {{Multiscale modeling using goal-oriented adaptivity and numerical homogenization}}, | |

year | = | {2009}, | |

month | = | {August}, | |

school | = | {University of Texas}, | |

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title | = | {{Nanoshell-mediated laser surgery simulation for prostate cancer treatment}}, | |

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title | = | {{Optimization and real-time control for laser treatment of heterogeneous soft tissues}}, | |

author | = | {Feng, Y. and Fuentes, D. and Hawkins, A. and Bass, J.M. andRylander, M.N.}, | |

journal | = | {Computer Methods in Applied Mechanics and Engineering}, | |

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title | = | {{Generalized Maximum Entropy, Convexity, and Machine Learning}}, | |

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school | = | {The Australian National University}, | |

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title | = | {Inducing Gazetteers for Named Entity Recognition by Large-Scale Clustering of Dependency Relations}, | |

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author | = | {Ayupov, A. and Marchenko, A. and Tiourin, V.}, | |

title | = | {An analytical approach to placement legalization}, | |

booktitle | = | {Proceedings of the 18th ACM Great Lakes symposium on VLSI}, | |

series | = | {GLSVLSI '08}, | |

year | = | {2008}, | |

isbn | = | {978-1-59593-999-9}, | |

location | = | {Orlando, Florida, USA}, | |

pages | = | {167--170}, | |

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url | = | {http://doi.acm.org/10.1145/1366110.1366152}, | |

doi | = | {http://doi.acm.org/10.1145/1366110.1366152}, | |

acmid | = | {1366152}, | |

publisher | = | {ACM}, | |

address | = | {New York, NY, USA}, |

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author | = | {Ayupov, A. and Kraginskiy, L.}, | |

booktitle | = | {Design Test Symposium (EWDTS), 2008 East-West}, | |

title | = | {A novel timing-driven placement algorithm using smooth timing analysis}, | |

year | = | {2008}, | |

month | = | {October}, | |

volume | = | {}, | |

number | = | {}, | |

pages | = | {137--140}, | |

doi | = | {10.1109/EWDTS.2008.5580152}, | |

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title | = | {{MRTI-Based Optimization and Real-Time Laser Surgical Control for Cancer Treatment Using Fast Inverse Analysis Techniques}}, | |

author | = | {Feng, Y. and Fuentes, D. and Hawkins, A. and Oden, J.T.}, | |

booktitle | = | {BioMedical Engineering and Informatics, 2008. BMEI 2008.International Conference on}, | |

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year | = | {2008}, | |

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title | = | {{Integration of Ab Initio Nuclear Physics Calculations with Optimization Techniques}}, | |

author | = | {Sosonkina, M. and Sharda, A. and Negoita, A. and Vary, J.P.}, | |

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title | = | {{Photons, photosynthesis, and high-performance computing: challenges, progress, and promise of modeling metabolism in green algae}}, | |

author | = | {Chang, C. and Graf, P, and Alber, D. and Kim, K., and Murray, G. and Posewitz, M. and Seibert, M.}, | |

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year | = | {2008}, | |

volume | = | {125}, | |

pages | = | {012048}, | |

organization | = | {Institute of Physics Publishing}, | |

url | = | {http://dx.doi.org/10.1088/1742-6596/125/1/012048} |

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title | = | {{CRF-OPT: An efficient high-quality conditional random field solver}}, | |

author | = | {Chen, M. and Chen, Y. and Brent, M.R.}, | |

booktitle | = | {Proceedings of the Twenty-Third AAAI Conference on Artificial Intelligence}, | |

year | = | {2008}, | |

organization | = | {Association for the Advancement of Artificial Intelligence}, | |

url | = | {http://www.aaai.org/Papers/AAAI/2008/AAAI08-161.pdf} |

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title | = | {{Solution of the nonlinear elasticity imaging inverse problem: the compressible case}}, | |

author | = | {Gokhale, N.H. and Barbone, P.E. and Oberai, A.A}, | |

journal | = | {Inverse Problems}, | |

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year | = | {2008}, | |

pages | = | {045010}, | |

url | = | {http://dx.doi.org/10.1088/0266-5611/24/4/045010} | |

publisher | = | {IOP Publishing} |

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title | = | {{Computational infrastructure for the real-time patient-specific treatment of cancer}}, | |

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booktitle | = | {Advances in Numerical Heat Transfer, vol. 3}, | |

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year | = | {2008}, | |

chapter | = | {9}, |

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title | = | {Mining and Modeling Relations between Formal and Informal {C}hinese Phrases from Web Corpora}, | |

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address | = | {Honolulu, Hawaii}, | |

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title | = | {{Parameters identification in a seawater intrusion model using adjoint sensitive method}}, | |

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title | = | {{Identification of the hydraulic conductivities in a saltwater intrusion problem}}, | |

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title | = | "DFT-Based Nanostructure Investigation", | |

address | = | "Argonne, Illinois, USA", | |

institution | = | "Argonne National Laboratory", | |

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note | = | {Final Report, Department of Chemical and Fuels Engineering, University of Utah, DOE contract FC26-01BC15313}, | |

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title | = | {Discriminative Methods for Label Sequence Learning} | |

author | = | {Altun, Y.} | |

year | = | {2005}, | |

month | = | {May}, | |

school | = | {Brown University}, |

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author | = | {Sande, H.V. and Boonen, T. and Podoleanu, I. and Henrotte, F. and Hameyer, K.}, | |

journal | = | {Magnetics, IEEE Transactions on}, | |

title | = | {Simulation of a three-phase transformer using an improved anisotropy model}, | |

year | = | {2004}, | |

month | = | march, | |

volume | = | {40}, | |

number | = | {2}, | |

pages | = | { 850 - 855}, | |

doi | = | {10.1109/TMAG.2004.825004}, | |

url | = | {http://dx.doi.org/10.1109/TMAG.2004.825004}, | |

ISSN | = | {0018-9464} |

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author | = | {B. Roark and M. Saraclar and M. Collins and M. Johnson} | |

title | = | {Discriminative language modeling with conditional random fields and the perceptron algorithm}, | |

booktitle | = | {Proceedings of the 42nd Annual Meeting of the Association for Computational Linguistics (ACL'04)}, | |

month | = | {July}, | |

year | = | {2004}, | |

publisher | = | {Association for Computational Linguistics}, | |

url | = | {http://acl.ldc.upenn.edu/acl2004/main/pdf/320_pdf_2-col.pdf} |

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author | = | {D. Bernholdt and J. Nieplocha and P. Sadayappan}, | |

title | = | {Raising the Level of Programming Abstraction in Scalable Programming Models},
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booktitle | = | {Proceedings of the HPCA Workshop on Productivity and Performance in High-End Computing}, | |

year | = | {2004}, | |

publisher | = | {IEEE Computer Society}, | |

url | = | {http://www.emsl.pnl.gov/docs/global/papers/pphec-tce-xga-final.pdf} |

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author | = | {D. Bodoff}, | |

title | = | "Relevance Models to Help Estimate Document and Query Models", | |

journal | = | "ACM Transactions on Information Systems", | |

volume | = | {22}, | |

issue | = | {3}, | |

month | = | {July}, | |

year | = | {2004}, | |

pages | = | {357 - 380}, |

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title | = | {{Finite Element Analysis & Design Optimization in a Distributed Computing Environment}}, | |

author | = | {Rajan, S.D. and Belegundu, A.D. and Lee, D. and Damle, A.S. and St. Ville, J}, | |

booktitle | = | {10th AIAA/ISSMO Multidisciplinary Analysis and Optimization Conference}, | |

year | = | {2004}, | |

organization | = | {American Institute of Aeronautics and Astronautics} |

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author | = | {David A. Smith and Noah A. Smith}, | |

title | = | {Bilingual Parsing with Factored Estimation: Using English to Parse Korean}, | |

booktitle | = | {Proceedings of the Conference on Empirical Methods in Natural Language Processing}, | |

year | = | {2004}, | |

pages | = | {49--54}, | |

url | = | {http://nlp.cs.jhu.edu/~nasmith/biparse.pdf}, |

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author | = | {R. Malouf and G. van Noord}, | |

title | = | {Wide Coverage Parsing with Stochastic Attribute Value Grammars}, | |

booktitle | = | {IJCNLP-04 Workshop: Beyond shallow analyses - Formalisms and statistical modeling for deep analyses.}, | |

month | = | {March}, | |

year | = | {2004}, | |

publisher | = | {JST CREST}, | |

url | = | {http://www-tsujii.is.s.u-tokyo.ac.jp/bsa/papers/malouf.pdf}, |

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author | = | {J. Kazama and J. Tsujii}, | |

title | = | "Evaluation and extension of maximum entropy models with inequality constraints",
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journal | = | "Proceedings of the 2002 Empirical Methods in Natural Language Processing", | |

pages | = | "137--144", | |

year | = | "2003", | |

url | = | {http://www-tsujii.is.s.u-tokyo.ac.jp/~kazama/papers/kazama_emnlp03r.pdf} |

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author | = | {Hala Dajani}, | |

title | = | "Client-Server Component Architecture for Scientific Computing",
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school | = | "Rice University", | |

year | = | {2003}, | |

url | = | {http://www.caam.rice.edu/caam/trs/2003/TR03-07.pdf} |

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author | = | {W. Scholz and J. Fidler and T. Schrefl and D. Suess and R. Dittrich and H. Forster and V. Tsiantos}, | |

title | = | "Scalable parallel micromagnetic solvers for magnetic nanostructures",
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journal | = | "Comp. Mat. Sci.", | |

year | = | {2003}, | |

pages | = | "366--383", | |

volume | = | 28, | |

url | = | {http://magnet.atp.tuwien.ac.at/scholz/projects/diss/diss.pdf}, | |

note | = | {http://magnet.atp.tuwien.ac.at/scholz/magpar">Parallel Finite Element Micromagnetics Package (magpar)}, |

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author | = | {W. Scholz and D. Suess and R. Dittrich and T. Schrefl and V. Tsiantos and H. Forster and J. Fidler}, | |

title | = | "Implementation of a high performance parallel finite element micromagnetics package",
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journal | = | "J. Magn. Magn. Mater.", | |

year | = | 2004, | |

url | = | {http://magnet.atp.tuwien.ac.at/scholz/projects/papers/preprint/scholz/icm2003/scholz_petsc.pdf} |

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author | = | {J. Liang and Y.-Q. Chen}, | |

title | = | "Optimization of A fed-batch fermentation process control competition problem using the NEOS server",
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journal | = | "Proceedings - Institution of Mechanical Engineers Part I Journal of Systems and Control Engineering", | |

year | = | 2003, | |

volume | = | 217; Part 5, | |

pages | = | "427--432", | |

url | = | {http://www.csois.usu.edu/publications/pdf/pub104.pdf} |

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author | = | {J. Liang and Y.-Q. Chen an M. Meng and R. Fullmer}, | |

title | = | "Solving tough optimal control problems by Network Enabled Optimization Server (NEOS)", | |

journal | = | "Proc. of the 2003 IEEE Intelligent Automation Conference" | |

year | = | 2003, | |

url | = | {http://mechatronics.ece.usu.edu/yqchen/paper/03C15_IEEE_CIAC2003_IAC-M24.pdf} |

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author | = | {J. Wang and X. Chi and T. Gu}, | |

title | = | "Nonlinear Conjugate Gradient Methods and Their Implementations by TAO on Dawning 2000-II", | |

note | = | "In Inter. Conf. on Parallel Algorithms and Computing Environments (ICPACE) 2003", | |

url | = | {http://www.sccas.cn/ICPACE/papers/Jian%20Wang.pdf} |

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author | = | {C. Bischof and H. Busker and B. Lang and A. Rasch}, | |

title | = | {An interactive environment for supporting the transition from simulation to optimization}, | |

journal | = | {Sci. Prog.}, | |

volume | = | {4}, | |

year | = | {2003}, | |

pages | = | {263--272}, | |

url | = | {http://www.iospress.nl/html/10589244.php}, |

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title | = | {{Solving nonlinear magnetic problems using Newton trust region methods}}, | |

author | = | {Vande Sande, H. and De Gersem, H. and Henrotte, F. and Hameyer, K.}, | |

year | = | {2003}, | |

journal | = | {IEEE Transactions on Magnetics}, | |

volume | = | {30}, | |

number | = | {3}, | |

pages | = | {1709-1712}, | |

url | = | {http://dx.doi.org/10.1109/TMAG.2003.810212} |

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title | = | {{Accelerating non-linear time-harmonic problems by a Hybrid Picard-Newton approach}}, | |

author | = | {Vande Sande, H. and Boonen, T. and De Gersem, H. and Henrotte, F. and Hameyer, K.}, | |

year | = | {2002}, | |

booktitle | = | {Proceedings of the 10th International Symposium on Numerical Field Calculations in Electrical Engineering}, | |

pages | = | {85--90}, | |

url | = | {http://www.iem.rwth-aachen.de/uploads/bibliotest/pub_988.pdf} |

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author | = | {Hanna Wallach}, | |

title | = | "Efficient Training of Conditional Random Fields", | |

school | = | "University of Edinburgh", | |

year | = | "2002", | |

url | = | {http://www.inference.phy.cam.ac.uk/hmw26/publications.html} |

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author | = | {S. Yabusaki and S. Bryant and S. Chen and G. Fann and G. Flach and W. Gray and J. Holland and K. Jordan and R. Maier and J. Malard and D. Rector and W. Soll and C. Steefel and A. Tompson and H. Trease and M. Wheeler and B. Wood}, | |

title | = | "Mechanistic Process Modeling for Subsurface Remediation", | |

month | = | "August", | |

year | = | "2002", | |

note | = | "PNNL-14011, Published by Pacific Northwest National Laboratory for the Environmental Molecular Sciences Laboratory", | |

url | = | {http://www.pnl.gov/main/publications/external/technical_reports/pnnl-14011.pdf}, |

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editor | = | {J. Dongarra and I. Foster and G. Fox and W. Gropp and K. Kennedy and L. Torczon and A. White}, | |

title | = | "The Sourcebook of Parallel Computing", | |

series | = | "The Morgan Kaufmann Series in Computer Architecture and Design", | |

publisher | = | "Elsevier", | |

month | = | "November", | |

year | = | "2002", | |

page | = | "842", | |

url | = | {http://books.elsevier.com/computerscience/default.asp?isbn=1558608710}, |

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author | = | {Robert Malouf}, | |

title | = | "A comparison of algorithms for maximum entropy parameter estimation",
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booktitle | = | "In Sixth Conf. on Natural Language Learning" | |

pages | = | "49--55", | |

year | = | {2002}, | |

url | = | {http://cnts.ua.ac.be/conll2002/abstracts/04955mal.html} |

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author | = | {J. Malard}, | |

title | = | "Parallel restricted maximum likelihood estimation for linear models with a dense exogenous matrix",
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journal | = | "Parallel Computing", | |

volume | = | "28", | |

number | = | "2", | |

pages | = | "343--353", | |

year | = | "2002", | |

url | = | {http://csm.pnl.gov/statistics/dll/pml.html} | |

note | = | "http://csm.pnl.gov/statistics/dll/pml.html">ACRE software package for maximum likelihood estimates of covariance matrices", |

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author | = | {L. v. d. Beek and G. Bouma and J. Daciuk and T. Gaustad and R. Malouf and G. v. Noord and R. Prins and B. Villada}, | |

title | = | "Algorithms for Linguistic Processing. NWO PIONIER Progress Report.", | |

year | = | "2002", | |

url | = | {http://odur.let.rug.nl/~vannoord/alp/midterm.ps} |

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