MTC Envelope: Defining the capability of large scale computers in the context of parallel scripting applications
Zhao Zhang, Daniel Katz, Justin M. Wozniak Michael Wilde, Ian T. Foster
Proc. HPDC 2013.
[PDF] Slides: [PDF]

Swift/T: Large-scale application composition via distributed-memory data flow processing
Justin M. Wozniak, Timothy G. Armstrong, Michael Wilde, Daniel Katz, Ewing Lusk, Ian T. Foster
Proc. CCGrid 2013.
[PDF] Slides: [PDF]

Evaluating cloud computing techniques for smart power grid design using parallel scripting
Ketan Maheshwari, Kenneth Birman, Justin M. Wozniak, Devin Van Zandt
Proc. CCGrid 2013.
[PDF] Slides: [PDF]

A model for tracing and debugging large-scale task-parallel programs with MPE
Justin M. Wozniak, Anthony Chan, Timothy G. Armstrong, Michael Wilde, Ewing Lusk, Ian T. Foster
Proc. Workshop on Leveraging Abstractions and Semantics in High-performance Computing at PPoPP 2013.
[PDF] Slides: [PDF]

A case for optimistic coordination in HPC storage systems
Philip Carns, Kevin Harms, Dries Kimpe, Justin M. Wozniak, Robert Ross, Lee Ward, Matthew Curry, Ruth Klundt, Geoff Danielson, Cengiz Karakoyunlu, John Chandy, Bradley Settlemyer, William Gropp
Proc. Petascale Data Storage Workshop at SC 2012.
[PDF] Slides: [PDF]

Design and analysis of data management in scalable parallel scripting
Zhao Zhang, Daniel S. Katz, Justin M. Wozniak, Allan Espinosa, and Ian Foster
Proc. SC 2012.
[PDF]

Aesop: Expressing concurrency in high-performance system software
Dries Kimpe, Philip Carns, Kevin Harms, Justin M. Wozniak, Samuel Lang, and Robert Ross
Proc. Conference on Networking, Architecture, and Storage, 2012.
[PDF]

Turbine: A distributed-memory dataflow engine for extreme-scale many-task applications
Justin M. Wozniak, Timothy G. Armstrong, Michael Wilde, Ketan Maheshwari, Daniel S. Katz, Matei Ripeanu, Ewing L. Lusk, and Ian T. Foster.
Proc. Workshop on Scalable Workflow Enactment Engines and Technologies at SIGMOD, 2012.
[PDF] Slides: [PDF]

ExM: High level dataflow programming for extreme-scale systems
Timothy G. Armstrong, Justin M. Wozniak, Michael Wilde, Ketan Maheshwari, Daniel S. Katz, Matei Ripeanu, Ewing L. Lusk, and Ian T. Foster.
Proc. HotPar (poster series), 2012.
[PDF] Poster: [PDF]

Coasters: Uniform resource provisioning and access for scientific computing on clouds and grids
Mihael Hategan, Justin M. Wozniak and Ketan Maheshwari.
Proc. Utility and Cloud Computing, 2011.
[PDF] Slides: [PDF]

JETS: Language and system support for many-parallel-task computing
Justin M. Wozniak and Michael Wilde.
Proc. Workshop on Parallel Programming Models and Systems Software for High-End Computing at ICPP, 2011.
[PDF] Slides: [PDF]

Swift: A language for distributed parallel scripting
Michael Wilde, Mihael Hategan, Justin M. Wozniak, Ben Clifford, Daniel S. Katz and Ian Foster.
Parallel Computing 37(9), 2011.
[PDF]

GEMS: User control for cooperative scientific repositories
Justin M. Wozniak, Paul Brenner, Santanu Chatterjee, Douglas Thain, Aaron Striegel, and Jesús Izaguirre.
Book chapter in Computational and Data Grids: Principles, Designs, and Applications, 2011.
[PDF]

Flexible cloud computing through Swift Coasters
Ketan Maheshwari, Justin Wozniak, Allan Espinosa, Daniel Katz, and Michael Wilde.
Proc. Cloud Computing and Its Applications, 2011.
[PDF]

Many task computing and Blue Waters
Daniel S. Katz, Timothy G. Armstrong, Zhao Zhang, Michael Wilde, and Justin M. Wozniak.
(Report regarding feasibility of many-task computing on the Blue Waters system) 2010.
[PDF]

C-MPI: A DHT implementation for grid and HPC environments
Justin M. Wozniak, Bryan Jacobs, Rob Latham, Sam Lang, Seung Woo Son, and Robert Ross.
Preprint ANL/MCS-P1746-0410, 2010.
[PDF]

Distributed object storage rebuild analysis via simulation with GOBS
Justin M. Wozniak, Seung Woo Son, and Robert Ross.
Proc. Workshop on Fault-Tolerance for HPC at Extreme Scale at the International Conference on Dependable Systems and Networks, 2010.
[PDF] Slides: [PPTX] [PDF]

Future directions in large-scale storage systems
Justin M. Wozniak
Invited talk at CUCIS, Northwestern University, 2010.
Slides: [PDF]

Case studies in storage access by loosely coupled petascale applications
Justin M. Wozniak and Michael Wilde.
Proc. Petascale Data Storage Workshop at SC, 2009.
[PDF] Slides: [ODP] [PDF]

Investigating deadline-driven metascheduling policy via simulation with East
Justin M. Wozniak and Aaron Striegel.
Book chapter in Quantitative Quality of Service for Grid Computing: Applications for Heterogeneity, Large-Scale Distribution and Dynamic Environments.
Lizhe Wang and Jinjun Chen, editors, 2009.
[PDF]

Pathways into large parameter search spaces: Experiences with molecular hyperdynamics
Justin M. Wozniak, Santanu Chatterjee, Paul Brenner, Douglas Thain, Aaron Striegel, Jeff Peng, and Jesús A. Izaguirre.
Proc. UK e-Science All Hands Meeting, Workshop 6, 2008.
[PDF] Slides: [ODP] [PDF]

Biomolecular committor probability calculation enabled by processing in network storage
Paul Brenner, Justin M. Wozniak, Douglas Thain, Aaron Striegel, Jeff Peng, and Jesús A. Izaguirre.
Parallel Computing, 34(11), 2008.
[PDF] [DOI]

Overdrive Controllers for Distributed Scientific Computation
Justin M. Wozniak.
Ph.D. Dissertation, University of Notre Dame, 2008.
[PDF]

Making the best of a bad situation: Prioritized storage management in GEMS
Justin M. Wozniak, Paul Brenner, Douglas Thain, Aaron Striegel and Jesús A. Izaguirre.
Future Generation Computer Systems, 24(1), 2008.
[PDF] [DOI]

Overdrive controllers for distributed scientific computation
Justin M. Wozniak
Proc. TCSC Doctoral Symposium, IEEE Computer Society, 2007.
[PDF] Slides: [ODP] [PDF]

Biomolecular path sampling enabled by processing in network storage
Paul Brenner, Justin M. Wozniak, Douglas Thain,
Aaron Striegel, Jeffrey W. Peng, and Jesús A. Izaguirre.
Proc. Workshop on High Performance Computational Biology, IEEE Computer Society, 2007.
[PDF]

Effects of low-quality computation time estimates in policed schedulers
Justin M. Wozniak, Yingxin Jiang and Aaron Striegel.
Proc. Annual Simulation Symposium, IEEE Computer Society, 2007.
[PDF] Slides: [ODP] [PDF]

Access control for a replica management database
Justin M. Wozniak, Paul Brenner, Doug Thain, Aaron Striegel, Jesús Izaguirre.
Proc. Workshop on Storage Security and Survivability, ACM, 2006.
[PDF] Slides: [ODP] [PDF]

Applying feedback control to a replica management system
Justin M. Wozniak, Paul Brenner, Doug Thain, Aaron Striegel, Jesús Izaguirre.
Proc. Southeastern Symposium on System Theory, IEEE Control Systems Society, 2006.
[PDF]

Separating abstractions from resources in a tactical storage system
Douglas Thain, Sander Klous, Justin M. Wozniak,
Paul Brenner, Aaron Striegel, Jesús Izaguirre.
Proc. Supercomputing, IEEE Computer Society, 2005.
[PDF]

Generosity and gluttony in GEMS: Grid Enabled Molecular Simulation
Justin M. Wozniak, Paul Brenner, Douglas Thain, Aaron Striegel, and Jesús A. Izaguirre.
Proc. High Performance Distributed Computing, IEEE Computer Society, 2005.
[PDF]

GIPSE: Streamlining the management of simulation on the grid
Justin M. Wozniak, Aaron Striegel, David Salyers and Jesús A. Izaguirre.
Proc. Annual Simulation Symposium, IEEE Computer Society, 2005.
[PDF]

Control System Theory in Maple  
Justin M. Wozniak.
Master’s Thesis, University of Waterloo, 2003.
[PDF]

Message passing in Maple  
Justin M. Wozniak.
Technical report CS-2004-02, School of Computer Science, University of Waterloo, 2003.
[PDF]

Langevin stabilization of molecular dynamics
Jesús A. Izaguirre, Daniel P. Catarello, Justin M. Wozniak, and Robert D. Skeel.
Journal of Chemical Physics, 2001.
[PDF]