Actual source code: petscsf.h

petsc-3.3-p7 2013-05-11
  1: /*
  2:    A star forest (SF) describes a communication pattern
  3: */
 6:  #include petscsys.h

  8: PETSC_EXTERN PetscClassId PETSCSF_CLASSID;

 10: /*S
 11:    PetscSF - PETSc object for communication using star forests

 13:    Level: intermediate

 15:   Concepts: star forest

 17: .seealso: PetscSFCreate()
 18: S*/
 19: typedef struct _p_PetscSF* PetscSF;

 21: /*S
 22:    PetscSFNode - specifier of owner and index

 24:    Level: beginner

 26:   Concepts: indexing, stride, distribution

 28: .seealso: PetscSFSetGraph()
 29: S*/
 30: typedef struct {
 31:   PetscInt rank;                /* Rank of owner */
 32:   PetscInt index;               /* Index of node on rank */
 33: } PetscSFNode;

 35: /*E
 36:     PetscSFSynchronizationType - Type of synchronization for PetscSF

 38: $  PETSCSF_SYNCHRONIZATION_FENCE - simplest model, synchronizing across communicator
 39: $  PETSCSF_SYNCHRONIZATION_LOCK - passive model, less synchronous, requires less setup than PETSCSF_SYNCHRONIZATION_ACTIVE, but may require more handshakes
 40: $  PETSCSF_SYNCHRONIZATION_ACTIVE - active model, provides most information to MPI implementation, needs to construct 2-way process groups (more setup than PETSCSF_SYNCHRONIZATION_LOCK)

 42:    Level: beginner

 44: .seealso: PetscSFSetSynchronizationType()
 45: E*/
 46: typedef enum {PETSCSF_SYNCHRONIZATION_FENCE,PETSCSF_SYNCHRONIZATION_LOCK,PETSCSF_SYNCHRONIZATION_ACTIVE} PetscSFSynchronizationType;
 47: PETSC_EXTERN const char *const PetscSFSynchronizationTypes[];

 49: #if !defined(PETSC_HAVE_MPI_WIN_CREATE) /* The intent here is to be able to compile even without a complete MPI. */
 50: typedef struct MPI_Win_MISSING *MPI_Win;
 51: #endif

 53: PETSC_EXTERN PetscErrorCode PetscSFInitializePackage(const char*);
 54: PETSC_EXTERN PetscErrorCode PetscSFFinalizePackage(void);
 55: PETSC_EXTERN PetscErrorCode PetscSFCreate(MPI_Comm comm,PetscSF*);
 56: PETSC_EXTERN PetscErrorCode PetscSFDestroy(PetscSF*);
 57: PETSC_EXTERN PetscErrorCode PetscSFView(PetscSF,PetscViewer);
 58: PETSC_EXTERN PetscErrorCode PetscSFSetFromOptions(PetscSF);
 59: PETSC_EXTERN PetscErrorCode PetscSFSetSynchronizationType(PetscSF,PetscSFSynchronizationType);
 60: PETSC_EXTERN PetscErrorCode PetscSFSetRankOrder(PetscSF,PetscBool);
 61: PETSC_EXTERN PetscErrorCode PetscSFSetGraph(PetscSF,PetscInt nroots,PetscInt nleaves,const PetscInt *ilocal,PetscCopyMode modelocal,const PetscSFNode *remote,PetscCopyMode moderemote);
 62: PETSC_EXTERN PetscErrorCode PetscSFGetGraph(PetscSF,PetscInt *nroots,PetscInt *nleaves,const PetscInt **ilocal,const PetscSFNode **iremote);
 63: PETSC_EXTERN PetscErrorCode PetscSFCreateEmbeddedSF(PetscSF,PetscInt nroots,const PetscInt *selected,PetscSF *newsf);
 64: PETSC_EXTERN PetscErrorCode PetscSFCreateArray(PetscSF,MPI_Datatype,void*,void*);
 65: PETSC_EXTERN PetscErrorCode PetscSFDestroyArray(PetscSF,MPI_Datatype,void*,void*);
 66: PETSC_EXTERN PetscErrorCode PetscSFReset(PetscSF);
 67: PETSC_EXTERN PetscErrorCode PetscSFGetRanks(PetscSF,PetscInt*,const PetscMPIInt**,const PetscInt**,const PetscMPIInt**,const PetscMPIInt**);
 68: PETSC_EXTERN PetscErrorCode PetscSFGetDataTypes(PetscSF,MPI_Datatype,const MPI_Datatype**,const MPI_Datatype**);
 69: PETSC_EXTERN PetscErrorCode PetscSFGetWindow(PetscSF,MPI_Datatype,void*,PetscBool,PetscMPIInt,PetscMPIInt,PetscMPIInt,MPI_Win*);
 70: PETSC_EXTERN PetscErrorCode PetscSFFindWindow(PetscSF,MPI_Datatype,const void*,MPI_Win*);
 71: PETSC_EXTERN PetscErrorCode PetscSFRestoreWindow(PetscSF,MPI_Datatype,const void*,PetscBool,PetscMPIInt,MPI_Win*);
 72: PETSC_EXTERN PetscErrorCode PetscSFGetGroups(PetscSF,MPI_Group*,MPI_Group*);
 73: PETSC_EXTERN PetscErrorCode PetscSFGetMultiSF(PetscSF,PetscSF*);
 74: PETSC_EXTERN PetscErrorCode PetscSFCreateInverseSF(PetscSF,PetscSF*);

 76: /* broadcasts rootdata to leafdata */
 77: PETSC_EXTERN PetscErrorCode PetscSFBcastBegin(PetscSF,MPI_Datatype,const void *rootdata,void *leafdata);
 78: PETSC_EXTERN PetscErrorCode PetscSFBcastEnd(PetscSF,MPI_Datatype,const void *rootdata,void *leafdata);
 79: /* Reduce leafdata into rootdata using provided operation */
 80: PETSC_EXTERN PetscErrorCode PetscSFReduceBegin(PetscSF,MPI_Datatype,const void *leafdata,void *rootdata,MPI_Op);
 81: PETSC_EXTERN PetscErrorCode PetscSFReduceEnd(PetscSF,MPI_Datatype,const void *leafdata,void *rootdata,MPI_Op);
 82: /* Atomically modifies (using provided operation) rootdata using leafdata from each leaf, value at root at time of modification is returned in leafupdate. */
 83: PETSC_EXTERN PetscErrorCode PetscSFFetchAndOpBegin(PetscSF,MPI_Datatype,void *rootdata,const void *leafdata,void *leafupdate,MPI_Op);
 84: PETSC_EXTERN PetscErrorCode PetscSFFetchAndOpEnd(PetscSF,MPI_Datatype,void *rootdata,const void *leafdata,void *leafupdate,MPI_Op);
 85: /* Compute the degree of every root vertex (number of leaves in its star) */
 86: PETSC_EXTERN PetscErrorCode PetscSFComputeDegreeBegin(PetscSF,const PetscInt **degree);
 87: PETSC_EXTERN PetscErrorCode PetscSFComputeDegreeEnd(PetscSF,const PetscInt **degree);
 88: /* Concatenate data from all leaves into roots */
 89: PETSC_EXTERN PetscErrorCode PetscSFGatherBegin(PetscSF,MPI_Datatype,const void *leafdata,void *multirootdata);
 90: PETSC_EXTERN PetscErrorCode PetscSFGatherEnd(PetscSF,MPI_Datatype,const void *leafdata,void *multirootdata);
 91: /* Distribute distinct values to each leaf from roots */
 92: PETSC_EXTERN PetscErrorCode PetscSFScatterBegin(PetscSF,MPI_Datatype,const void *multirootdata,void *leafdata);
 93: PETSC_EXTERN PetscErrorCode PetscSFScatterEnd(PetscSF,MPI_Datatype,const void *multirootdata,void *leafdata);


 96: #endif