Actual source code: vscreate.c

petsc-3.11.3 2019-06-26
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  1: /*
  2:     The VECSCATTER (vec scatter) interface routines, callable by users.
  3: */

  5:  #include <petsc/private/vecscatterimpl.h>

  7: /* Logging support */
  8: PetscClassId VEC_SCATTER_CLASSID;

 10: PetscFunctionList VecScatterList              = NULL;
 11: PetscBool         VecScatterRegisterAllCalled = PETSC_FALSE;

 13: /*@C
 14:   VecScatterSetType - Builds a vector scatter, for a particular vector scatter implementation.

 16:   Collective on VecScatter

 18:   Input Parameters:
 19: + vscat - The vector scatter object
 20: - type - The name of the vector scatter type

 22:   Options Database Key:
 23: . -vecscatter_type <type> - Sets the vector scatter type; use -help for a list
 24:                      of available types

 26:   Notes:
 27:   See "petsc/include/petscvec.h" for available vector scatter types (for instance, VECSCATTERMPI1, or VECSCATTERMPI3NODE).

 29:   Use VecScatterDuplicate() to form additional vectors scatter of the same type as an existing vector scatter.

 31:   Level: intermediate

 33: .keywords: vector scatter, set, type
 34: .seealso: VecScatterGetType(), VecScatterCreate()
 35: @*/
 36: PetscErrorCode VecScatterSetType(VecScatter vscat, VecScatterType type)
 37: {
 38:   PetscBool      match;
 40:   PetscErrorCode (*r)(VecScatter);

 44:   PetscObjectTypeCompare((PetscObject)vscat, type, &match);
 45:   if (match) return(0);

 47:   PetscFunctionListFind(VecScatterList,type,&r);
 48:   if (!r) SETERRQ1(PETSC_COMM_SELF,PETSC_ERR_ARG_UNKNOWN_TYPE, "Unknown vector scatter type: %s",type);

 50:   if (vscat->ops->destroy) {
 51:     (*vscat->ops->destroy)(vscat);
 52:     vscat->ops->destroy = NULL;
 53:   }

 55:   (*r)(vscat);
 56:   return(0);
 57: }

 59: /*@C
 60:   VecScatterGetType - Gets the vector scatter type name (as a string) from the VecScatter.

 62:   Not Collective

 64:   Input Parameter:
 65: . vscat  - The vector scatter

 67:   Output Parameter:
 68: . type - The vector scatter type name

 70:   Level: intermediate

 72: .keywords: vector scatter, get, type, name
 73: .seealso: VecScatterSetType(), VecScatterCreate()
 74: @*/
 75: PetscErrorCode VecScatterGetType(VecScatter vscat, VecScatterType *type)
 76: {

 82:   VecScatterRegisterAll();
 83:   *type = ((PetscObject)vscat)->type_name;
 84:   return(0);
 85: }

 87: /*@
 88:   VecScatterSetFromOptions - Configures the vector scatter from the options database.

 90:   Collective on VecScatter

 92:   Input Parameter:
 93: . vscat - The vector scatter

 95:   Notes:
 96:     To see all options, run your program with the -help option, or consult the users manual.
 97:           Must be called before VecScatterSetUp() but before the vector scatter is used.

 99:   Level: beginner

101:   Concepts: vectorscatter^setting options
102:   Concepts: vectorscatter^setting type

104: .keywords: VecScatter, set, options, database
105: .seealso: VecScatterCreate(), VecScatterDestroy(), VecScatterSetUp()
106: @*/
107: PetscErrorCode VecScatterSetFromOptions(VecScatter vscat)
108: {
110:   PetscBool      opt;
111:   VecScatterType defaultType;
112:   char           typeName[256];
113:   PetscMPIInt    size;


118:   PetscObjectOptionsBegin((PetscObject)vscat);
119:   MPI_Comm_size(PetscObjectComm((PetscObject)vscat), &size);

121:   /* Handle vector type options */
122:   if (((PetscObject)vscat)->type_name) {
123:     defaultType = ((PetscObject)vscat)->type_name;
124:   } else {
125:     if (size > 1) defaultType = VECSCATTERMPI1;
126:     else defaultType = VECSCATTERSEQ;
127:   }

129:   VecScatterRegisterAll();
130:   PetscOptionsFList("-vecscatter_type","Vector Scatter type","VecScatterSetType",VecScatterList,defaultType,typeName,256,&opt);
131:   if (size > 1 && opt) {
132:     VecScatterSetType(vscat,typeName);
133:   } else {
134:     VecScatterSetType(vscat,defaultType);
135:   }

137:   vscat->beginandendtogether = PETSC_FALSE;
138:   PetscOptionsBool("-vecscatter_merge","Use combined (merged) vector scatter begin and end","VecScatterCreate",vscat->beginandendtogether,&vscat->beginandendtogether,NULL);
139:   if (vscat->beginandendtogether) {
140:     PetscInfo(vscat,"Using combined (merged) vector scatter begin and end\n");
141:   }

143:   PetscOptionsEnd();
144:   return(0);
145: }

147: /*@C
148:   VecScatterRegister -  Adds a new vector scatter component implementation

150:   Not Collective

152:   Input Parameters:
153: + name        - The name of a new user-defined creation routine
154: - create_func - The creation routine itself

156:   Notes:
157:   VecScatterRegister() may be called multiple times to add several user-defined vectors

159:   Sample usage:
160: .vb
161:     VecScatterRegister("my_vecscatter",MyVecScatterCreate);
162: .ve

164:   Then, your vector scatter type can be chosen with the procedural interface via
165: .vb
166:     VecScatterCreate(MPI_Comm, VecScatter *);
167:     VecScatterSetType(VecScatter,"my_vectorscatter_name");
168: .ve
169:    or at runtime via the option
170: .vb
171:     -vecscatter_type my_vectorscatter_name
172: .ve

174:   Level: advanced

176: .keywords: VecScatter, Register

178: .seealso: VecScatterRegisterAll(), VecScatterRegisterDestroy()
179: @*/
180: PetscErrorCode VecScatterRegister(const char sname[], PetscErrorCode (*function)(VecScatter))
181: {

185:   VecInitializePackage();
186:   PetscFunctionListAdd(&VecScatterList,sname,function);
187:   return(0);
188: }

190: /* ---------------------------------------------------------------- */
191: /*@
192:    VecScatterCreate - Creates a vector scatter context.

194:    Collective on Vec

196:    Input Parameters:
197: +  xin - a vector that defines the shape (parallel data layout of the vector)
198:          of vectors from which we scatter
199: .  yin - a vector that defines the shape (parallel data layout of the vector)
200:          of vectors to which we scatter
201: .  ix - the indices of xin to scatter (if NULL scatters all values)
202: -  iy - the indices of yin to hold results (if NULL fills entire vector yin)

204:    Output Parameter:
205: .  newctx - location to store the new scatter context

207:    Options Database Keys: (uses regular MPI_Sends by default)
208: .  -vecscatter_view         - Prints detail of communications
209: .  -vecscatter_view ::ascii_info    - Print less details about communication
210: .  -vecscatter_merge        - VecScatterBegin() handles all of the communication, VecScatterEnd() is a nop
211:                               eliminates the chance for overlap of computation and communication
212: .  -vecscatter_packtogether - Pack all messages before sending, receive all messages before unpacking
213:                               will make the results of scatters deterministic when otherwise they are not (it may be slower also).

215:     Level: intermediate

217:   Notes:
218:    If both xin and yin are parallel, their communicator must be on the same
219:    set of processes, but their process order can be different.
220:    In calls to VecScatter() you can use different vectors than the xin and
221:    yin you used above; BUT they must have the same parallel data layout, for example,
222:    they could be obtained from VecDuplicate().
223:    A VecScatter context CANNOT be used in two or more simultaneous scatters;
224:    that is you cannot call a second VecScatterBegin() with the same scatter
225:    context until the VecScatterEnd() has been called on the first VecScatterBegin().
226:    In this case a separate VecScatter is needed for each concurrent scatter.

228:    Currently the MPI_Send() use PERSISTENT versions.
229:    (this unfortunately requires that the same in and out arrays be used for each use, this
230:     is why  we always need to pack the input into the work array before sending
231:     and unpack upon receiving instead of using MPI datatypes to avoid the packing/unpacking).

233:    Both ix and iy cannot be NULL at the same time.

235:    Concepts: scatter^between vectors
236:    Concepts: gather^between vectors

238: .seealso: VecScatterDestroy(), VecScatterCreateToAll(), VecScatterCreateToZero()
239: @*/
240: PetscErrorCode VecScatterCreate(Vec xin,IS ix,Vec yin,IS iy,VecScatter *newctx)
241: {
242:   VecScatter        ctx;
243:   PetscErrorCode    ierr;
244:   PetscMPIInt       size,xsize,ysize,result;
245:   MPI_Comm          comm,xcomm,ycomm;

249:   *newctx = NULL;

251:   if (!ix && !iy) SETERRQ(PetscObjectComm((PetscObject)xin),PETSC_ERR_SUP,"Cannot pass default in for both input and output indices");

253:   /* Get comm from xin and yin */
254:   PetscObjectGetComm((PetscObject)xin,&xcomm);
255:   MPI_Comm_size(xcomm,&xsize);
256:   PetscObjectGetComm((PetscObject)yin,&ycomm);
257:   MPI_Comm_size(ycomm,&ysize);

259:   if (xsize > 1 && ysize > 1) {
260:     MPI_Comm_compare(xcomm,ycomm,&result);
261:     if (result == MPI_UNEQUAL) SETERRQ(PETSC_COMM_SELF,PETSC_ERR_ARG_NOTSAMECOMM,"VecScatterCreate: parallel vectors xin and yin must have identical/congruent/similar communicators");
262:   }

264:   comm = xsize > ysize ? xcomm : ycomm; /* If xsize==ysize, we use ycomm as comm of ctx, which does affect correctness */
265:   size = xsize > ysize ? xsize : ysize;

267:   VecScatterInitializePackage();
268:   PetscHeaderCreate(ctx,VEC_SCATTER_CLASSID,"VecScatter","Vector Scatter","Vec",comm,VecScatterDestroy,VecScatterView);

270:   ctx->from_v  = xin;
271:   ctx->to_v    = yin;
272:   ctx->from_is = ix;
273:   ctx->to_is   = iy;
274:   VecGetLocalSize(xin,&ctx->from_n);
275:   VecGetLocalSize(yin,&ctx->to_n);

277:   /* Set default scatter type */
278:   if (size == 1) {VecScatterSetType(ctx,VECSCATTERSEQ);}
279:   else {VecScatterSetType(ctx,VECSCATTERMPI1);}

281:   VecScatterSetFromOptions(ctx);
282:   VecScatterSetUp(ctx);

284:   *newctx = ctx;
285:   return(0);
286: }