Publications
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Publications

2018, Oct 24    

Publications List

2018

  1. Maddali, S., Calvo-Almazan, I., Almer, J., Kenesei, P., Park, J.-S., Harder, R., … Hruszkewycz, S. O. (2018). Sparse recovery of undersampled intensity patterns for coherent diffraction imaging at high X-ray energies. Scientific Reports, 8(1), 4959.
  2. Ghosh, S., Nashed, Y. S. G., Cossairt, O., & Katsaggelos, A. (2018). ADP: Automatic differentiation ptychography. In Computational Photography (ICCP), 2018 IEEE International Conference on (pp. 1–10). IEEE.
  3. Cherukara, M. J., Nashed, Y. S. G., & Harder, R. J. (2018). Real-time coherent diffraction inversion using deep generative networks. ArXiv Preprint ArXiv:1806.03992.
  4. Gilles, M. A., Nashed, Y. S. G., Du, M., Jacobsen, C., & Wild, S. M. (2018). 3D x-ray imaging of continuous objects beyond the depth of focus limit. Optica, 5(9), 1078–1086.

2017

  1. Deng, J., Hong, Y. P., Chen, S., Nashed, Y. S. G., Peterka, T., Levi, A. J. F., … Jacobsen, C. (2017). Nanoscale x-ray imaging of circuit features without wafer etching. Phys. Rev. B, 95(10).
  2. Deng, J., Vine, D. J., Chen, S., Jin, Q., Nashed, Y. S. G., Peterka, T., … Jacobsen, C. (2017). X-ray ptychographic and fluorescence microscopy of frozen-hydrated cells using continuous scanning. Scientific Reports, 7(1), 445.
  3. Jacobsen, C. J., de Andrade, V., Deng, J., Du, M., Gürsoy, D., Nashed, Y. S., & Peterka, T. (2017). Wavefront Reconstruction in 3D X-ray Microscopy. In Digital Holography and Three-Dimensional Imaging (pp. W2A–12). Optical Society of America.
  4. Nashed, Y. S. G., Peterka, T., Deng, J., & Jacobsen, C. (2017). Distributed automatic differentiation for ptychography. Procedia Computer Science, 108, 404–414.
  5. Zhang, Y., Godaliyadda, G. M. D., Nashed, Y. S. G., Ferrier, N., Gulsoy, E. B., & Phatak, C. (2017). Under-sampling and image reconstruction for scanning electron microscopes. Microscopy and Microanalysis, 23(S1), 136–137.
  6. Jacobsen, C., Deng, J., & Nashed, Y. (2017). Strategies for high-throughput focused-beam ptychography. Journal of Synchrotron Radiation, 24(5), 1078–1081.
  7. Ulvestad, A., Nashed, Y., Beutier, G., Verdier, M., Hruszkewycz, S. O., & Dupraz, M. (2017). Identifying Defects with Guided Algorithms in Bragg Coherent Diffractive Imaging. Scientific Reports, 7(1), 9920.

2016

  1. Deng, J., Vine, D. J., Chen, S., Nashed, Y. S. G., Jin, Q., Peterka, T., … Jacobsen, C. (2016). Advances and challenges in cryo ptychography at the Advanced Photon Source. In AIP conference proceedings (Vol. 1696, p. 020030). AIP Publishing.
  2. Chen, S., Deng, J., Nashed, Y. S. G., Jin, Q., Vine, D. J., Peterka, T., … Vogt, S. (2016). Simultaneously Synchrotron X-ray Fluorescence and Ptychographic Imaging of Frozen Biological Single Cells. Microscopy and Microanalysis, 22(S3), 90–91.
  3. Jones, M. W. M., Phillips, N. W., Van Riessen, G. A., Abbey, B., Vine, D. J., Nashed, Y. S. G., … others. (2016). Simultaneous X-ray fluorescence and scanning X-ray diffraction microscopy at the Australian Synchrotron XFM beamline. Journal of Synchrotron Radiation, 23(5), 1151–1157.

2015

  1. Nashed, Y. (2015). Every factor helps: Rapid Ptychographic Reconstruction. In APS Meeting Abstracts.
  2. Deng, J., Vine, D. J., Chen, S., Nashed, Y. S. G., Jin, Q., Phillips, N. W., … Jacobsen, C. J. (2015). Simultaneous cryo X-ray ptychographic and fluorescence microscopy of green algae. Proceedings of the National Academy of Sciences, 201413003.
  3. Deng, J., Nashed, Y. S. G., Chen, S., Phillips, N. W., Peterka, T., Ross, R., … Vine, D. J. (2015). Continuous motion scan ptychography: characterization for increased speed in coherent x-ray imaging. Optics Express, 23(5), 5438–5451.
  4. Deng, J., Vine, D. J., Chen, S., Nashed, Y. S. G., Peterka, T., Ross, R., … Jacobsen, C. J. (2015). Opportunities and limitations for combined fly-scan ptychography and fluorescence microscopy. In X-Ray Nanoimaging: Instruments and Methods II (Vol. 9592, p. 95920U). International Society for Optics and Photonics.
  5. Chen, S., Deng, J., Vine, D. J., Nashed, Y. S. G., Jin, Q., Peterka, T., … Vogt, S. (2015). Simultaneous x-ray nano-ptychographic and fluorescence microscopy at the bionanoprobe. In X-Ray Nanoimaging: Instruments and Methods II (Vol. 9592, p. 95920I). International Society for Optics and Photonics.
  6. Phatak, C., Nashed, Y., & Peterka, T. (2015). Towards Multiresolution Phase Retrieval using Electron Ptychography. Microscopy and Microanalysis, 21(S3), 2151–2152.

2014

  1. Nashed, Y. S. G. (2014). Parallel Bio-Inspired Methods for Model Optimization and Pattern Recognition.
  2. Nashed, Y. S. G., Vine, D. J., Peterka, T., Deng, J., Ross, R., & Jacobsen, C. (2014). Parallel ptychographic reconstruction. Optics Express, 22(26), 32082–32097.

2013

  1. Ugolotti, R., Nashed, Y. S. G., Mesejo, P., Ivekovič, Š. P., Mussi, L., & Cagnoni, S. (2013). Particle swarm optimization and differential evolution for model-based object detection. Applied Soft Computing, 13(6), 3092–3105.
  2. Podevijn, G., O’Grady, R., Nashed, Y. S. G., & Dorigo, M. (2013). Gesturing at subswarms: Towards direct human control of robot swarms. In Conference Towards Autonomous Robotic Systems (pp. 390–403). Springer, Berlin, Heidelberg.
  3. Ugolotti, R., Nashed, Y. S. G., Mesejo, P., & Cagnoni, S. (2013). Algorithm configuration using GPU-based metaheuristics. In Proceedings of the 15th annual conference companion on Genetic and evolutionary computation (pp. 221–222). ACM.
  4. Fernandez-Lozano, C., Seoane, J. A., Mesejo, P., Nashed, Y. S. G., Cagnoni, S., & Dorado, J. (2013). 2D-PAGE Texture classification using support vector machines and genetic algorithms. In of the 4th International Conference on Bioinformatics Models, Methods and Algorithms (pp. 5–14).
  5. Fernandez-Lozano, C., Seoane, J. A., Mesejo, P., Nashed, Y. S. G., Cagnoni, S., & Dorado, J. (2013). Texture classification of proteins using support vector machines and bio-inspired metaheuristics. In International Joint Conference on Biomedical Engineering Systems and Technologies (pp. 117–130). Springer, Berlin, Heidelberg.
  6. Ugolotti, R., Mesejo, P., Nashed, Y. S. G., & Cagnoni, S. (2013). GPU-based Automatic Configuration of Differential Evolution: a case study. In Portuguese Conference on Artificial Intelligence (pp. 114–125). Springer, Berlin, Heidelberg.

2012

  1. Nashed, Y. S. G., Ugolotti, R., Mesejo, P., & Cagnoni, S. (2012). libCudaOptimize: an open source library of GPU-based metaheuristics. In Proceedings of the 14th annual conference companion on Genetic and evolutionary computation (pp. 117–124). ACM.
  2. Ugolotti, R., Nashed, Y. S. G., & Cagnoni, S. (2012). Real-time GPU based road sign detection and classification. In International Conference on Parallel Problem Solving from Nature (pp. 153–162). Springer, Berlin, Heidelberg.
  3. Nashed, Y. S. G., Mesejo, P., Ugolotti, R., Dubois-Lacoste, J., & Cagnoni, S. (2012). A comparative study of three GPU-based metaheuristics. In International Conference on Parallel Problem Solving from Nature (pp. 398–407). Springer, Berlin, Heidelberg.
  4. Mussi, L., Ivekovic, S., Nashed, Y. S. G., & Cagnoni, S. (2012). Multi-view human body pose estimation with CUDA-PSO. International Journal of Adaptive, Resilient and Autonomic Systems (IJARAS), 3(4), 51–65.
  5. Nashed, Y. S. G. (2012). GPU hierarchical quilted self organizing maps for multimedia understanding. In Multimedia (ISM), 2012 IEEE International Symposium on (pp. 491–492). IEEE.
  6. Cagnoni, S., Cordón, O., Mesejo, P., Nashed, Y. S. G., & Ugolotti, R. (2012). First Results and Future Developments of the MIBISOC Project in the IBISlab of the University of Parma. In Proceedings of the 14th annual conference companion on Genetic and evolutionary computation (pp. 509–516). ACM.

2011

  1. Mussi, L., Nashed, Y. S. G., & Cagnoni, S. (2011). GPU-based asynchronous particle swarm optimization. In Proceedings of the 13th annual conference on Genetic and evolutionary computation (pp. 1555–1562). ACM.
  2. Nashed, Y. S. G., & Davis, D. N. (2011). Fuzzy Q-Learning for First Person Shooters. In 12th Middle Eastern Simulation and Modelling Multiconference, MESM 2011-2nd GAMEON-ARABIA Conference, GAMEON-ARABIA 2011. EUROSIS.