Papers using ROMIO

Please help us keep this list up to date. Contact mpich-discuss@mcs.anl.gov for any corrections or additions.

Last updated at Tue Apr 27 11:05:10 CDT 2010.

Recent publications

[1] David Buettner, Julian Kunkel, and Thomas Ludwig. Using non-blocking I/O operations in high performance computing to reduce execution times. In To be Published in Proc. of the 16th European PVM/MPI User's Group Meeting (Euro PVM/MPI 2009), September 2009. [ bib ]
[2] Saba Sehrish, Jun Wang, and Rajeev Thakur. Conflict detection algorithm to minimize locking for MPI-IO atomicity. In To be Published in Proc. of the 16th European PVM/MPI User's Group Meeting (Euro PVM/MPI 2009), September 2009. [ bib ]
[3] Javier García Blas, Florin Isaila, Jesús Carretero, Robert Latham, and Robert Ross. Multiple-level MPI file write-back and prefetching for Blue Gene systems. In To be Published in Proc. of the 16th European PVM/MPI User's Group Meeting (Euro PVM/MPI 2009), September 2009. [ bib ]
[4] J. Logan and Phillip Dickens. Dynamic object based I/O. (invited paper). In To appear: IEEE 5th International Workshop on Intelligent Data acquisition and Advanced Computing Systems: Technology and Applications, August 2009. [ bib ]
[5] Mohamad Chaarawi, Suneet Chandok, and Edgar Gabriel. Performance Evaluation of Collective Write Algorithms in MPI I/O. Lecture Notes in Computer Science, 5544:185-194, May 2009. [ bib | DOI ]
[6] Ketan Kulkarni and Edgar Gabriel. Evaluating Algorithms for Shared File Pointer Operations in MPI I/O. Lecture Notes in Computer Science, 5544:280-289, May 2009. [ bib | DOI ]
[7] Phillip M. Dickens and Jeremy Logan. Y-lib: a user level library to increase the performance of MPI-IO in a lustre file system environment. In HPDC '09: Proceedings of the 18th ACM international symposium on High performance distributed computing, pages 31-38, New York, NY, USA, 2009. ACM. [ bib | DOI ]
[8] Phillip Dickens and J. Logan. A high performance implementation of MPI-IO for a Lustre file system environment. To appear: Concurrency and Computation: Practice and Experience, 2009. [ bib ]
[9] Phillip M. Dickens and Jeremy Logan. Towards a high performance implementation of MPI-IO on the Lustre file system. In Proceedings of GADA'08: Grid computing, high-performAnce and Distributed Applications. Monterrey, Mexico, November 2008. [ bib ]
[10] Wei keng Liao and Alok Choudhary. Dynamically adapting file domain partitioning methods for collective I/O based on underlying parallel file system locking protocols. In Proceedings of International Conference for High Performance Computing, Networking, Storage and Analysis (SC08), Austin, Texas, November 2008. [ bib ]
[11] Arifa Nisar, Wei keng Liao, and Alok Choudhary. Scaling parallel I/O performance through I/O delegate and caching system. In Proceedings of International Conference for High Performance Computing, Networking, Storage and Analysis (SC08), Austin, Texas, November 2008. [ bib ]
[12] William Gropp, Dries Kimpe, Robert B. Ross, Rajeev Thakur, and Jesper Larsson Träff. Self-consistent MPI-IO performance requirements and expectations. In Proc. of the 15th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2008), September 2008. [ bib ]
[13] Francisco Javier García Blas, Florin Isaila, Jesús Carretero, and Thomas Grossmann. Implementation and evaluation of an MPI-IO interface for GPFS in ROMIO. In Proc. of the 15th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2008), September 2008. [ bib ]
[14] Florin Isaila, Javier García Blas, Jesús Carretero, Wei keng Liao, and Alok Choudhary. AHPIOS: An MPI-based ad-hoc parallel I/O system. In 14th Intl Conference on Parallel and Distributed Systems. Melbourne, Victoria, Austraila, 2008. [ bib ]
[15] Javier García Blas, Florin Isaila, David E. Singh, and Jesús Carretero. View-based collective I/O for MPI-IO. In 8th IEEE International Symposium on Cluster Computing and the Grid, 2008. [ bib ]
[16] Wei keng Liao, Avery Ching, Kenin Coloma, Arifa Nisar, Alok Choudhary, Jackie Chen, Ramanan Sankaran, and Scott Klasky. Using MPI file caching to improve parallel write performance for large-scale scientific applications. In Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis (SC 2007), Reno, Nevada, November 2007. [ bib ]
[17] D. Kimpe, R. Ross, S. Vandewalle, and S. Poedts. Transparent log-based data storage in MPI-IO applications. In Proc. of the 14th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2007), September 2007. [ bib ]
[18] Robert Latham, William Gropp, Robert B. Ross, and Rajeev Thakur. Extending the MPI-2 generalized request interface. In Proc. of the 14th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2007), pages 223-232, September 2007. [ bib ]
[19] A. Calderon, F. Garcia-Carballeira, Florin Isaila, Rainer Keller, and Alexander Schulz. Faul tolerant file models for MPI-IO parallel file systems. In Proc. of the 14th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2007), pages 153-160, September 2007. [ bib ]
[20] Weikuan Yu, Jeffrey Vetter, and Shane Canon. OPAL: An open-source MPI-IO library over Cray XT. In International Workshop on Storage Network Architecture and Parallel I/O (SNAPI'07), September 2007. [ bib ]
[21] J. Logan and Phillip Dickens. Using object based files for high performance parallel I/O. In Proceedings of the IEEE 4th International Workshop on Intelligent Data acquisition and Advanced Computing Systems: Technology and Applications. Dortmund, Germany, September 2007. [ bib ]
[22] Weikuan Yu, Jeffrey Vetter, R. Shane Canon, and Song Jiang. Exploiting Lustre file joining for effective collective IO. In Seventh IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2007), May 2007. [ bib ]
[23] Wei keng Liao, Kenin Coloma, Alok Choudhary, and Lee Ward. Cooperative client-side file caching for MPI applications. International Journal of High Performance Computing Applications, 21(2):144-154, May 2007. [ bib ]
[24] Wei keng Liao, Avery Ching, Kenin Coloma, Alok Choudhary, and Lee Ward. An implementation and evaluation of client-side file caching for MPI-IO. In Proceedings of the 21st International Parallel and Distributed Processing Symposium (IPDPS), Long Beach, California, March 2007. [ bib ]
[25] Robert Latham, Robert Ross, and Rajeev Thakur. Implementing MPI-IO Atomic Mode and Shared File Pointers Using MPI One-Sided Communication. International Journal of High Performance Computing Applications, 21(2):132-143, 2007. [ bib | DOI | arXiv | http | .pdf | Abstract ]
[26] Wei keng Liao, Kenin Coloma, Alok Choudhary, Lee Ward, Eric Russell, and Neil Pundit. Scalable design and implementations for mpi parallel overlapping I/O. IEEE Transactions on Parallel and Distributed System, 17(11):1264-1276, November 2006. [ bib ]
[27] Andrew B. Hastings and Alok Choudhary. Exploiting shared memory to improve parallel I/O performance. Lecture Notes in Computer Science, 4192:212-221, September 2006. [ bib ]
[28] Jan Seidel, Rudolf Berrendorf, Marcel Birkner, and Marc-Andre Hermanns. High-bandwidth remote parallel I/O with the distributed memory filesystem MEMFS. Lecture Notes in Computer Science, 4192:222-229, September 2006. [ bib ]
[29] Kenin Coloma, Avery Ching, Alok Choudhary, Wei keng Liao, Robert Ross, Rajeev Thakur, and Lee Ward. A new flexible MPI collective I/O implementation. In Proceedings of the IEEE Conference on Cluster Computing (Cluster 2006), Barcelona, Spain, September 2006. [ bib ]
[30] Gokhan Memik, Mahmut T. Kandemir, Wei-Keng Liao, and Alok Choudhary. Multicollective I/O: A technique for exploiting inter-file access patterns. ACM Transactions on Storage (TOS), 2(3):349-360, August 2006. [ bib ]
[31] Jonghyun Lee, Robert B. Ross, Scott Atchley, Micah Beck, , and Rajeev Thakur. MPI-IO/L: Efficient remote I/O for MPI-IO via logistical networking. In Proceedings of the 20th IEEE International Parallel and Distributed Processing Symposium (IPDPS 2006), Rhodes Island, Greece, April 2006. [ bib ]
[32] Hao Yu, R. K. Sahoo, C. Howson, George. Almasi, J. G. Castanos, M. Gupta, Jose. E. Moreira, J. J. Parker, T. E. Engelsiepen, Robert Ross, Rajeev Thakur, Robert Latham, and W. D. Gropp. High performance file I/O for the BlueGene/L supercomputer. In Proceedings of the 12th International Symposium on High-Performance Computer Architecture (HPCA-12), February 2006. [ bib | .pdf ]
[33] Wei keng Liao, Alok Choudhary, Kenin Coloma, Lee Ward, Eric Russell, and Neil Pundit. MPI Atomicity and Concurrent Overlapping I/O, chapter 10, pages 203-218. John Wiley & Sons Inc, November 2005. ISBN: 978-0-471-65471-1. [ bib ]
[34] Robert Latham, Robert Ross, and Rajeev Thakur. Implementing MPI-IO shared file pointers without file system support. In Proceedings of EuroPVM/MPI 2005, September 2005. [ bib ]
[35] Rajeev Thakur, Robert Ross, and Robert Latham. Implementing byte-range locks using MPI one-sided communication. In Proceedings of the 12th European PVM/MPI Users' Group Meeting (Euro PVM/MPI 2005), Recent Advances in Parallel Virtual Machine and Message Passing Interface, Lecture Notes in Computer Science, LNCS 3666, Springer, pages 119-128, September 2005. [ bib ]
[36] Wei keng Liao, Kenin Coloma, Alok Choudhary, and Lee Ward. Cooperative Write-Behind Data Buffering for MPI I/O. In Proceedings of the 12th European Parallel Virtual Machine and Message Passing Interface Conference (EURO PVM/MPI), Sorrento (Naples), Italy, September 2005. [ bib ]
[37] Wei keng Liao, Kenin Coloma, Alok Choudhary, Lee Ward, Eric Russell, and Sonja Tideman. Collective Caching: Application-aware Client-side File Caching. In Proceedings of the 14th IEEE International Symposium on High Performance Distributed Computing (HPDC-14), Research Triangle Park, NC, July 2005. [ bib ]
[38] Kenin Coloma, Alok Choudhary, Wei keng Liao, Lee Ward, and Sonja Tideman. DAChe: Direct Access Cache System for Parallel I/O. In Proceedings of the International Supercomputer Conference, Heidelberg, Germany, June 2005. [ bib ]
[39] Robert Ross, Robert Latham, William Gropp, Rajeev Thakur, and Brian Toonen. Implementing MPI-IO atomic mode without file system support. In Proceedings of CCGrid 2005, May 2005. [ bib ]
[40] Rob Latham, Rob Ross, and Rajeev Thakur. The impact of file systems on MPI-IO scalability. Lecture Notes in Computer Science, 3241:87-96, September 2004. [ bib | http | .pdf | Abstract ]
[41] William Gropp, Robert B. Ross, and Neill Miller. Providing efficient I/O redundancy in MPI environments. In Proceedings of EuroPVM/MPI 2004, September 2004. [ bib ]
[42] Jonghyun Lee, Xiaosong Ma, Robert B. Ross, Rajeev Thakur, and Marianne Winslett. RFS: Implementing efficient and flexible remote file access for MPI-IO. In Proceedings of Cluster 2004, September 2004. [ bib ]
[43] Kenin Coloma, Alok Choudhary, Wei keng Liao, Lee Ward, Eric Russell, and Neil Pundit. Scalable High-level Caching for Parallel I/O. In Proceedings of the International Parallel and Distributed Parallel Processing Symposium (IPDPS), New Mexico, April 2004. [ bib ]
[44] Wei keng Liao, Alok Choudhary, Kenin Coloma, George K. Thiruvathukal, Lee Ward, Eric Russell, and Neil Pundit. Scalable Implementations of MPI Atomicity for Concurrent Overlapping I/O. In Proceedings of the International Conference on Parallel Processing (ICPP), Kaohsiung, Taiwan, October 2003. [ bib ]
[45] Avery Ching, Alok Choudhary, Kenin Coloma, Wei keng Liao, Robert Ross, and William Gropp. Noncontiguous I/O Accesses Through MPI-IO. In Proceedings of the International Symposium on Cluster Computing and the Grid (CCGrid), Tokyo, Japan, May 2003. [ bib ]


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